Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col1a1P11087 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col1a1P11087 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col1a1P11087 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col1a1P11087 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
Col1a1P11087 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col1a1P11087 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.09
Col1a1P11087 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm14020-201ENSMUST00000118165 662 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm25520-201ENSMUST00000158389 118 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm27025-201ENSMUST00000182392 942 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.02□□□□□ -2.09
Col1a1P11087 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm42465-201ENSMUST00000197036 492 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.02□□□□□ -2.09
Col1a1P11087 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col1a1P11087 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Col1a1P11087 Gm23455-201ENSMUST00000083331 100 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.02□□□□□ -2.09
Col1a1P11087 Gm26082-201ENSMUST00000104070 127 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.01□□□□□ -2.09
Col1a1P11087 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Col1a1P11087 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm24261-201ENSMUST00000083744 104 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Col1a1P11087 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col1a1P11087 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm22665-201ENSMUST00000158720 275 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm5929-201ENSMUST00000166883 487 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.01□□□□□ -2.09
Col1a1P11087 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.01□□□□□ -2.09
Col1a1P11087 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col1a1P11087 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col1a1P11087 Gm26126-201ENSMUST00000083188 164 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Mir200b-201ENSMUST00000083615 70 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm10794-201ENSMUST00000099624 207 ntBASIC2.01□□□□□ -2.09
Col1a1P11087 Gm42852-201ENSMUST00000202649 1379 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm12512-201ENSMUST00000119620 217 ntBASIC2□□□□□ -2.09
Col1a1P11087 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm13210-201ENSMUST00000121483 273 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm15065-201ENSMUST00000121699 273 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm13424-201ENSMUST00000122301 354 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm24965-201ENSMUST00000157922 106 ntBASIC2□□□□□ -2.09
Col1a1P11087 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm10074-201ENSMUST00000174543 249 ntBASIC2□□□□□ -2.09
Col1a1P11087 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2□□□□□ -2.09
Col1a1P11087 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2□□□□□ -2.09
Col1a1P11087 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2□□□□□ -2.09
Col1a1P11087 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2□□□□□ -2.09
Col1a1P11087 AC131743.3-201ENSMUST00000222099 662 ntBASIC2□□□□□ -2.09
Col1a1P11087 AC109172.1-201ENSMUST00000227503 187 ntBASIC2□□□□□ -2.09
Col1a1P11087 CT025525.2-201ENSMUST00000227743 423 ntBASIC2□□□□□ -2.09
Col1a1P11087 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col1a1P11087 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Col1a1P11087 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Col1a1P11087 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col1a1P11087 Gm5937-201ENSMUST00000119715 643 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm15116-201ENSMUST00000122248 663 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm22026-201ENSMUST00000122735 281 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Col1a1P11087 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm22646-201ENSMUST00000175130 115 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm28383-201ENSMUST00000187563 139 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm29262-201ENSMUST00000190084 196 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm44076-201ENSMUST00000203072 520 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm44266-201ENSMUST00000205235 500 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Gm10088-201ENSMUST00000074116 423 ntBASIC1.99□□□□□ -2.09
Col1a1P11087 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col1a1P11087 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col1a1P11087 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Gm7909-201ENSMUST00000182688 614 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Gm37417-201ENSMUST00000195257 454 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Gm44011-201ENSMUST00000203336 394 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Gm19177-201ENSMUST00000204520 613 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 CT025525.1-201ENSMUST00000226325 1054 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Mir320-201ENSMUST00000083594 82 ntBASIC1.98□□□□□ -2.09
Col1a1P11087 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col1a1P11087 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col1a1P11087 Gm15106-201ENSMUST00000119691 821 ntBASIC1.97□□□□□ -2.09
Col1a1P11087 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.97□□□□□ -2.09
Col1a1P11087 Gm26181-201ENSMUST00000157687 106 ntBASIC1.97□□□□□ -2.09
Col1a1P11087 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms