Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
P06344 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
P06344 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Gm7853-201ENSMUST00000100708 478 ntBASIC2.69□□□□□ -1.98
P06344 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
P06344 Gm14518-201ENSMUST00000117351 542 ntBASIC2.69□□□□□ -1.98
P06344 Gm14751-201ENSMUST00000117693 222 ntBASIC2.69□□□□□ -1.98
P06344 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.69□□□□□ -1.98
P06344 Gm14835-201ENSMUST00000119039 315 ntBASIC2.69□□□□□ -1.98
P06344 Gm14240-201ENSMUST00000120353 546 ntBASIC2.69□□□□□ -1.98
P06344 Gm26027-201ENSMUST00000122725 268 ntBASIC2.69□□□□□ -1.98
P06344 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.69□□□□□ -1.98
P06344 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.69□□□□□ -1.98
P06344 Gm22236-201ENSMUST00000157093 106 ntBASIC2.69□□□□□ -1.98
P06344 Gm25066-201ENSMUST00000158145 123 ntBASIC2.69□□□□□ -1.98
P06344 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
P06344 Gm23053-201ENSMUST00000175136 96 ntBASIC2.69□□□□□ -1.98
P06344 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Gm28358-202ENSMUST00000189292 223 ntBASIC2.69□□□□□ -1.98
P06344 Gm28155-201ENSMUST00000191066 151 ntBASIC2.69□□□□□ -1.98
P06344 Gm37866-201ENSMUST00000191950 696 ntBASIC2.69□□□□□ -1.98
P06344 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.69□□□□□ -1.98
P06344 Gm42509-201ENSMUST00000197390 781 ntBASIC2.69□□□□□ -1.98
P06344 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.69□□□□□ -1.98
P06344 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.69□□□□□ -1.98
P06344 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.69□□□□□ -1.98
P06344 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.69□□□□□ -1.98
P06344 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.69□□□□□ -1.98
P06344 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
P06344 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
P06344 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.69□□□□□ -1.98
P06344 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
P06344 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
P06344 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.69□□□□□ -1.98
P06344 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
P06344 Gm25563-201ENSMUST00000104603 74 ntBASIC2.68□□□□□ -1.98
P06344 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.68□□□□□ -1.98
P06344 Gm14292-201ENSMUST00000118761 456 ntBASIC2.68□□□□□ -1.98
P06344 Gm12723-201ENSMUST00000120700 451 ntBASIC2.68□□□□□ -1.98
P06344 Gm13443-201ENSMUST00000120770 555 ntBASIC2.68□□□□□ -1.98
P06344 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.68□□□□□ -1.98
P06344 Gm11229-201ENSMUST00000121993 437 ntBASIC2.68□□□□□ -1.98
P06344 Gm24627-201ENSMUST00000122764 138 ntBASIC2.68□□□□□ -1.98
P06344 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.68□□□□□ -1.98
P06344 Gm23380-201ENSMUST00000158448 103 ntBASIC2.68□□□□□ -1.98
P06344 Gm25365-201ENSMUST00000158852 121 ntBASIC2.68□□□□□ -1.98
P06344 Gm3111-201ENSMUST00000167426 490 ntBASIC2.68□□□□□ -1.98
P06344 Gm22584-201ENSMUST00000177935 92 ntBASIC2.68□□□□□ -1.98
P06344 Gm25198-201ENSMUST00000178574 110 ntBASIC2.68□□□□□ -1.98
P06344 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.68□□□□□ -1.98
P06344 Mir6372-201ENSMUST00000185114 109 ntBASIC2.68□□□□□ -1.98
P06344 Gm29550-201ENSMUST00000185543 285 ntBASIC2.68□□□□□ -1.98
P06344 Gm28628-201ENSMUST00000187006 264 ntBASIC2.68□□□□□ -1.98
P06344 Gm28629-201ENSMUST00000187309 263 ntBASIC2.68□□□□□ -1.98
P06344 Gm29263-201ENSMUST00000188718 463 ntBASIC2.68□□□□□ -1.98
P06344 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.68□□□□□ -1.98
P06344 Gm42924-201ENSMUST00000197261 185 ntBASIC2.68□□□□□ -1.98
P06344 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.68□□□□□ -1.98
P06344 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.68□□□□□ -1.98
P06344 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
P06344 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.68□□□□□ -1.98
P06344 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.68□□□□□ -1.98
P06344 Gm23850-201ENSMUST00000083830 169 ntBASIC2.68□□□□□ -1.98
P06344 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.68□□□□□ -1.98
P06344 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
P06344 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.68□□□□□ -1.98
P06344 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.68□□□□□ -1.98
P06344 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
P06344 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
P06344 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.67□□□□□ -1.98
P06344 Gm25088-201ENSMUST00000101803 79 ntBASIC2.67□□□□□ -1.98
P06344 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
P06344 Gm3940-201ENSMUST00000105087 432 ntBASIC2.67□□□□□ -1.98
P06344 Gm12819-201ENSMUST00000122223 629 ntBASIC2.67□□□□□ -1.98
P06344 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.67□□□□□ -1.98
P06344 Gm22961-201ENSMUST00000157964 106 ntBASIC2.67□□□□□ -1.98
P06344 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.67□□□□□ -1.98
P06344 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
P06344 Mir6382-201ENSMUST00000184055 110 ntBASIC2.67□□□□□ -1.98
P06344 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.67□□□□□ -1.98
P06344 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.67□□□□□ -1.98
P06344 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.67□□□□□ -1.98
P06344 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.67□□□□□ -1.98
P06344 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.67□□□□□ -1.98
P06344 Gm43704-201ENSMUST00000196164 496 ntBASIC2.67□□□□□ -1.98
P06344 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.67□□□□□ -1.98
P06344 Gm34701-202ENSMUST00000204685 360 ntBASIC2.67□□□□□ -1.98
P06344 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.67□□□□□ -1.98
P06344 Gm45273-201ENSMUST00000211559 281 ntBASIC2.67□□□□□ -1.98
P06344 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.67□□□□□ -1.98
P06344 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.67□□□□□ -1.98
P06344 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.67□□□□□ -1.98
P06344 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.67□□□□□ -1.98
P06344 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
P06344 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.67□□□□□ -1.98
P06344 Gm7984-201ENSMUST00000060640 538 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms