Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm11389-201ENSMUST00000121407 430 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm24840-201ENSMUST00000122603 147 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm25807-201ENSMUST00000122783 305 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm27522-201ENSMUST00000183949 230 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm44425-201ENSMUST00000203739 429 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm44857-201ENSMUST00000208331 196 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm25131-201ENSMUST00000082653 151 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm23104-201ENSMUST00000083722 104 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm22578-201ENSMUST00000083730 107 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col5a1O88207 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm22186-201ENSMUST00000157822 122 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm24857-201ENSMUST00000158061 310 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm26401-201ENSMUST00000158502 76 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm17655-201ENSMUST00000167969 255 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col5a1O88207 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.07□□□□□ -2.08
Col5a1O88207 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm37162-201ENSMUST00000191708 551 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col5a1O88207 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.07□□□□□ -2.08
Col5a1O88207 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm24035-201ENSMUST00000082867 107 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col5a1O88207 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.07□□□□□ -2.08
Col5a1O88207 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Col5a1O88207 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col5a1O88207 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col5a1O88207 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.06□□□□□ -2.08
Col5a1O88207 Gm13731-201ENSMUST00000117332 196 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col5a1O88207 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm15116-201ENSMUST00000122248 663 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.06□□□□□ -2.08
Col5a1O88207 Gm25910-201ENSMUST00000157620 140 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm25836-201ENSMUST00000158918 123 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm17038-201ENSMUST00000166586 494 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm27443-201ENSMUST00000184660 98 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.06□□□□□ -2.08
Col5a1O88207 Gm18448-201ENSMUST00000186286 599 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm28688-201ENSMUST00000187301 268 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm20915-201ENSMUST00000191575 663 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.06□□□□□ -2.08
Col5a1O88207 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm44609-201ENSMUST00000207157 460 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col5a1O88207 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col5a1O88207 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col5a1O88207 Gm24917-201ENSMUST00000083935 104 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Snora33-201ENSMUST00000093556 129 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col5a1O88207 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.06□□□□□ -2.08
Col5a1O88207 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.06□□□□□ -2.08
Col5a1O88207 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col5a1O88207 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm12782-201ENSMUST00000117519 727 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm24241-201ENSMUST00000157787 145 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm17377-201ENSMUST00000165184 207 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm25069-201ENSMUST00000175238 86 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col5a1O88207 Mir8119-201ENSMUST00000183371 129 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm27817-201ENSMUST00000184302 233 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm28623-201ENSMUST00000187219 192 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm29167-201ENSMUST00000190024 377 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm38281-201ENSMUST00000192301 315 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm19761-201ENSMUST00000205372 391 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm46103-201ENSMUST00000217614 341 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm8249-201ENSMUST00000219225 465 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms