Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm27753-201ENSMUST00000184742 203 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm37989-201ENSMUST00000195202 803 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm45150-201ENSMUST00000206051 467 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm45034-201ENSMUST00000206831 482 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm6112-201ENSMUST00000208037 629 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.06□□□□□ -2.08
Sdc4O35988 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.06□□□□□ -2.08
Sdc4O35988 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm16383-201ENSMUST00000118122 232 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm12935-201ENSMUST00000119352 246 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm5937-201ENSMUST00000119715 643 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm12876-201ENSMUST00000120975 408 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm11797-201ENSMUST00000121336 754 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm25488-201ENSMUST00000158728 118 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.05□□□□□ -2.08
Sdc4O35988 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm24757-201ENSMUST00000176987 371 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm44476-201ENSMUST00000196225 91 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm17935-201ENSMUST00000196649 772 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm45772-201ENSMUST00000212961 240 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm19540-201ENSMUST00000221843 810 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm25124-201ENSMUST00000083345 164 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Sdc4O35988 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.05□□□□□ -2.08
Sdc4O35988 Gm13439-201ENSMUST00000117541 409 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm15488-201ENSMUST00000121682 670 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm2830-201ENSMUST00000140330 385 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm25460-201ENSMUST00000157954 127 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Mir7017-201ENSMUST00000184894 62 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm28745-201ENSMUST00000190069 305 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Gm18747-201ENSMUST00000198129 648 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc4O35988 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.04□□□□□ -2.08
Sdc4O35988 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc4O35988 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm11693-201ENSMUST00000119625 565 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm16458-201ENSMUST00000121428 502 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm11363-201ENSMUST00000121672 548 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm25321-201ENSMUST00000122558 102 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm24177-201ENSMUST00000158927 131 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Mir6901-201ENSMUST00000185062 62 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm20776-201ENSMUST00000189940 700 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm6059-201ENSMUST00000196903 340 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm18645-202ENSMUST00000212222 760 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc4O35988 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc4O35988 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.03□□□□□ -2.08
Sdc4O35988 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.03□□□□□ -2.09
Sdc4O35988 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Sdc4O35988 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Sdc4O35988 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Sdc4O35988 Gm16355-201ENSMUST00000128606 231 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm26371-201ENSMUST00000157829 104 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm17183-201ENSMUST00000171170 493 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm21809-201ENSMUST00000178495 468 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm27582-201ENSMUST00000184084 126 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm29604-201ENSMUST00000187176 163 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.02□□□□□ -2.09
Sdc4O35988 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.02□□□□□ -2.09
Sdc4O35988 Mir7217-201ENSMUST00000200304 62 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 Gm44478-201ENSMUST00000204875 114 ntBASIC2.02□□□□□ -2.09
Sdc4O35988 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms