Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm45701-201ENSMUST00000212049 235 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 AC107663.3-201ENSMUST00000225873 601 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm44435-201ENSMUST00000204379 4119 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm12803-201ENSMUST00000118907 821 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm12432-201ENSMUST00000119540 186 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm15115-201ENSMUST00000121145 264 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm22853-201ENSMUST00000174974 131 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm29658-201ENSMUST00000185404 230 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm37054-201ENSMUST00000193481 543 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm42967-201ENSMUST00000198647 2312 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm45063-201ENSMUST00000203726 472 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm7751-201ENSMUST00000212868 709 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 AC132104.1-201ENSMUST00000213615 260 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm20304-201ENSMUST00000218168 444 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm17872-201ENSMUST00000222550 532 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm20345-201ENSMUST00000175839 2414 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm15116-201ENSMUST00000122248 663 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm23470-201ENSMUST00000157129 120 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm22083-201ENSMUST00000157586 102 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm23116-201ENSMUST00000158481 67 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Mir5098-201ENSMUST00000175320 82 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm5322-201ENSMUST00000206142 699 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm44938-201ENSMUST00000208614 427 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a4A2AX52 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Gm24261-201ENSMUST00000083744 104 ntBASIC1.49□□□□□ -2.17
Col6a4A2AX52 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Col6a4A2AX52 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Mir878-201ENSMUST00000104680 78 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm28060-201ENSMUST00000191554 189 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm45445-201ENSMUST00000209586 232 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm20039-201ENSMUST00000210329 394 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm26301-201ENSMUST00000104813 95 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm11965-201ENSMUST00000122017 277 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Mir6985-201ENSMUST00000184641 61 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm43582-201ENSMUST00000196149 343 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm44718-201ENSMUST00000206886 359 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm25124-201ENSMUST00000083345 164 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Gm23347-201ENSMUST00000083823 82 ntBASIC1.48□□□□□ -2.17
Col6a4A2AX52 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Col6a4A2AX52 Gm13510-201ENSMUST00000118659 429 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 Gm16510-201ENSMUST00000153501 249 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col6a4A2AX52 Mir5136-201ENSMUST00000175573 76 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 Gm8151-201ENSMUST00000184817 871 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col6a4A2AX52 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.47□□□□□ -2.17
Col6a4A2AX52 Gm23336-201ENSMUST00000117023 123 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Mir1954-201ENSMUST00000175595 86 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Mir7016-201ENSMUST00000184308 72 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm29597-201ENSMUST00000188035 308 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms