Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mir6997-201ENSMUST00000184313 71 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Npn2-202ENSMUST00000189275 235 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm37037-201ENSMUST00000194475 424 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Mir208b-201ENSMUST00000104735 77 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm13574-201ENSMUST00000120482 394 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm26280-201ENSMUST00000157096 101 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm24900-201ENSMUST00000158128 134 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm18397-201ENSMUST00000176704 587 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Gm17872-201ENSMUST00000222550 532 ntBASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Scn3aA2ASI5 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Mir669d-201ENSMUST00000104644 121 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm14677-201ENSMUST00000117866 486 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm23230-201ENSMUST00000157298 133 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm24769-201ENSMUST00000158506 129 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm38041-201ENSMUST00000194445 661 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm44274-201ENSMUST00000203417 256 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm23733-201ENSMUST00000083750 106 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.41□□□□□ -2.02
Scn3aA2ASI5 Gm13603-201ENSMUST00000119404 83 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm15193-201ENSMUST00000120224 865 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm23980-201ENSMUST00000157135 158 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm17061-201ENSMUST00000163167 499 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Mir6901-201ENSMUST00000185062 62 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm43115-201ENSMUST00000196244 160 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm45395-201ENSMUST00000209891 559 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Gm46389-201ENSMUST00000223199 392 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Mir350-201ENSMUST00000083639 99 ntBASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Scn3aA2ASI5 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm23951-201ENSMUST00000104029 132 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm13087-201ENSMUST00000118298 256 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm16100-201ENSMUST00000120489 231 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm12607-201ENSMUST00000120724 493 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Trav20-201ENSMUST00000142754 347 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm16326-201ENSMUST00000162843 414 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm25198-201ENSMUST00000178574 110 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Mir8118-201ENSMUST00000183962 129 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm5731-201ENSMUST00000190969 481 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm35570-201ENSMUST00000198730 681 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm18327-201ENSMUST00000202426 830 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm23628-201ENSMUST00000082464 173 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Gm21286-201ENSMUST00000098035 545 ntBASIC2.4□□□□□ -2.03
Scn3aA2ASI5 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Scn3aA2ASI5 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn3aA2ASI5 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm14880-201ENSMUST00000117581 292 ntBASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm11460-201ENSMUST00000118200 361 ntBASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm6591-201ENSMUST00000121063 434 ntBASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm16510-201ENSMUST00000153501 249 ntBASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn3aA2ASI5 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 430.4 ms