Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm27952-201ENSMUST00000184748 105 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm28151-201ENSMUST00000189404 951 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm28404-201ENSMUST00000190242 453 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm43026-201ENSMUST00000202972 325 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm45590-201ENSMUST00000209715 262 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm46312-201ENSMUST00000220961 420 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm5955-201ENSMUST00000222712 219 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 AC126690.1-201ENSMUST00000228898 397 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Ear14-201ENSMUST00000049559 468 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm9845-201ENSMUST00000056409 598 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm23738-201ENSMUST00000082828 171 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.01□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm43881-201ENSMUST00000203051 2530 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm25833-201ENSMUST00000104137 133 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm11874-201ENSMUST00000117437 130 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm13076-201ENSMUST00000118041 204 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14172-201ENSMUST00000118255 644 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm6923-201ENSMUST00000118343 406 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14915-201ENSMUST00000120747 204 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm26477-201ENSMUST00000122617 323 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Cfap61-214ENSMUST00000167179 183 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm27028-201ENSMUST00000182303 399 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm27796-201ENSMUST00000183863 261 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Mir6933-201ENSMUST00000184982 81 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Mir6943-201ENSMUST00000185186 66 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm17966-201ENSMUST00000193453 594 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm5034-201ENSMUST00000199115 634 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm7652-201ENSMUST00000200440 1151 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm43899-201ENSMUST00000203675 246 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm44609-201ENSMUST00000207157 460 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm45245-201ENSMUST00000210082 376 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm46233-201ENSMUST00000217831 449 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC116589.3-202ENSMUST00000221770 649 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC116589.6-201ENSMUST00000222252 649 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC173482.2-201ENSMUST00000224044 750 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC140451.2-202ENSMUST00000226156 574 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC144628.2-201ENSMUST00000227374 352 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 AC127371.1-202ENSMUST00000228923 306 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm38083-201ENSMUST00000194758 3498 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14910-201ENSMUST00000121037 1805 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Igkv1-88A0A140T8N1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm23256-201ENSMUST00000102235 110 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm26140-201ENSMUST00000103807 110 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm23744-201ENSMUST00000104231 149 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm13761-201ENSMUST00000117238 807 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm12954-201ENSMUST00000118610 611 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Gm14647-201ENSMUST00000119392 680 ntBASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.99□□□□□ -2.09
Igkv1-88A0A140T8N1 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms