Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm3933-201ENSMUST00000195391 439 ntBASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm44881-201ENSMUST00000205425 367 ntBASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm6109-201ENSMUST00000223297 348 ntBASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC126673.3-201ENSMUST00000223414 3829 ntBASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trav4-3A0A0B4J1K1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm9427-201ENSMUST00000116187 651 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm8217-201ENSMUST00000119136 465 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm12880-201ENSMUST00000120652 494 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm14907-201ENSMUST00000121948 854 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm12693-201ENSMUST00000121965 483 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm13602-201ENSMUST00000122405 493 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm26105-201ENSMUST00000157253 190 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm24691-201ENSMUST00000157762 140 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm16289-201ENSMUST00000162079 183 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm7634-201ENSMUST00000185778 553 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm29516-201ENSMUST00000190402 468 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 CT030662.3-201ENSMUST00000228751 476 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.1□□□□□ -2.23
Trav4-3A0A0B4J1K1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm26015-201ENSMUST00000104402 125 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm15110-201ENSMUST00000117545 881 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm12871-201ENSMUST00000118758 438 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm15113-201ENSMUST00000119280 836 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm15112-201ENSMUST00000120152 860 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm22538-201ENSMUST00000158169 299 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm17085-201ENSMUST00000165425 502 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm24816-201ENSMUST00000175311 151 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm29262-201ENSMUST00000190084 196 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm43193-201ENSMUST00000197732 441 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm42625-201ENSMUST00000198611 922 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm43368-201ENSMUST00000200638 409 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm18026-201ENSMUST00000222789 727 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC164883.9-201ENSMUST00000228042 399 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Gm25813-201ENSMUST00000082748 191 ntBASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav4-3A0A0B4J1K1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Trav4-3A0A0B4J1K1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
Trav4-3A0A0B4J1K1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trav4-3A0A0B4J1K1 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm12765-201ENSMUST00000117273 615 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm12598-201ENSMUST00000117333 830 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm14885-201ENSMUST00000117969 496 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm12956-201ENSMUST00000122184 414 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm25625-201ENSMUST00000157221 96 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm25427-201ENSMUST00000157605 103 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm22315-201ENSMUST00000158010 143 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm24348-201ENSMUST00000158710 130 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm20450-201ENSMUST00000173652 147 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm18775-201ENSMUST00000190763 586 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm19202-201ENSMUST00000198096 808 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm43405-201ENSMUST00000198642 337 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm5317-201ENSMUST00000204445 847 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm20948-201ENSMUST00000211091 449 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Trav4-3A0A0B4J1K1 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms