Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm5287-201ENSMUST00000120666 598 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm11829-201ENSMUST00000121003 282 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm16533-201ENSMUST00000140035 228 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25621-201ENSMUST00000157223 114 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23325-201ENSMUST00000157422 129 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23895-201ENSMUST00000158108 160 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23409-201ENSMUST00000158516 237 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Snord53-201ENSMUST00000175146 78 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm26297-201ENSMUST00000179464 132 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Mir8118-201ENSMUST00000183962 129 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm21489-201ENSMUST00000189668 818 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm37037-201ENSMUST00000194475 424 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm43284-201ENSMUST00000200103 253 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm7624-201ENSMUST00000209702 435 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm2059-201ENSMUST00000212025 287 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 AC160865.1-201ENSMUST00000219873 151 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 AC165146.1-201ENSMUST00000223777 900 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 AC154576.2-202ENSMUST00000223916 688 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 AC174797.3-202ENSMUST00000224578 587 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm26055-201ENSMUST00000083038 107 ntBASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav11A0A0B4J1J9 Gm38382-201ENSMUST00000193790 2499 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm22543-201ENSMUST00000104347 94 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14594-201ENSMUST00000118052 537 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14590-201ENSMUST00000118934 537 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm15190-201ENSMUST00000120855 276 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm15799-201ENSMUST00000120899 289 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14694-201ENSMUST00000121856 282 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm15466-201ENSMUST00000122299 333 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25270-201ENSMUST00000122606 138 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23599-201ENSMUST00000157261 251 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25667-201ENSMUST00000157701 275 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm17065-201ENSMUST00000165245 239 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm20672-201ENSMUST00000176605 261 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14596-201ENSMUST00000180268 537 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14595-201ENSMUST00000180335 537 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm19257-201ENSMUST00000186121 183 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm7299-201ENSMUST00000194441 581 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm34701-202ENSMUST00000204685 360 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 AC118639.1-204ENSMUST00000226401 694 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm9845-201ENSMUST00000056409 598 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm26203-201ENSMUST00000082911 114 ntBASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25727-201ENSMUST00000104522 131 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14352-201ENSMUST00000119250 449 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm2830-201ENSMUST00000140330 385 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23137-201ENSMUST00000157559 107 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm22187-201ENSMUST00000157819 129 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm22330-201ENSMUST00000158068 115 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm24876-201ENSMUST00000158780 92 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23476-201ENSMUST00000158881 274 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm6264-202ENSMUST00000162896 1217 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm17538-201ENSMUST00000168236 327 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Mir3470b-201ENSMUST00000175563 126 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm24100-201ENSMUST00000178592 79 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm26189-201ENSMUST00000179879 107 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Mir8106-201ENSMUST00000184520 139 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm29600-201ENSMUST00000188687 377 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm29263-201ENSMUST00000188718 463 ntBASIC1.93□□□□□ -2.1
Trav11A0A0B4J1J9 Gm28384-201ENSMUST00000189079 463 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms