Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm4916-201ENSMUST00000126139 642 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm22538-201ENSMUST00000158169 299 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm22534-201ENSMUST00000158173 104 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm18956-201ENSMUST00000192857 480 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm44519-201ENSMUST00000206486 122 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Trav6-6A0A075B603 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm14894-201ENSMUST00000117170 270 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm13082-201ENSMUST00000118877 561 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm14333-201ENSMUST00000130484 264 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm22560-201ENSMUST00000157332 120 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm24770-201ENSMUST00000158505 92 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm22693-201ENSMUST00000175049 442 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm24417-201ENSMUST00000178123 79 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm24653-201ENSMUST00000178541 79 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm25934-201ENSMUST00000178642 79 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm5224-201ENSMUST00000183060 350 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm37449-201ENSMUST00000193016 270 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm29747-201ENSMUST00000194764 585 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm18658-201ENSMUST00000195558 270 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm19202-201ENSMUST00000198096 808 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm42828-201ENSMUST00000199669 469 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm43600-201ENSMUST00000202134 223 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm19885-201ENSMUST00000212853 343 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Gm35262-201ENSMUST00000215133 267 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Trav6-6A0A075B603 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Mir344c-201ENSMUST00000103919 92 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm24120-201ENSMUST00000103978 129 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm14677-201ENSMUST00000117866 486 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm13640-201ENSMUST00000118445 264 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm25270-201ENSMUST00000122606 138 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm24691-201ENSMUST00000157762 140 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm25066-201ENSMUST00000158145 123 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm28282-201ENSMUST00000186072 186 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm37098-201ENSMUST00000192290 244 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm44161-201ENSMUST00000203532 253 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm45395-201ENSMUST00000209891 559 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm45551-201ENSMUST00000211459 928 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 AC166830.1-201ENSMUST00000224201 533 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 AC137871.2-201ENSMUST00000226482 289 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.64□□□□□ -2.15
Trav6-6A0A075B603 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Gm14794-201ENSMUST00000118181 192 ntBASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Gm17538-201ENSMUST00000168236 327 ntBASIC1.63□□□□□ -2.15
Trav6-6A0A075B603 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms