Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14785-201ENSMUST00000120185 539 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm12044-201ENSMUST00000120335 213 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm11438-201ENSMUST00000121582 189 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm12095-201ENSMUST00000121962 816 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm24910-201ENSMUST00000157289 272 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm24393-201ENSMUST00000158135 97 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm23473-201ENSMUST00000158883 116 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm24968-201ENSMUST00000179817 107 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm37817-201ENSMUST00000195276 434 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm44125-201ENSMUST00000203068 448 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm18414-201ENSMUST00000210858 694 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm31849-201ENSMUST00000220306 375 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
H2afb2S4R1M3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm25213-201ENSMUST00000102388 113 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm25466-201ENSMUST00000103995 132 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm13614-201ENSMUST00000117306 503 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm8260-201ENSMUST00000119230 353 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm15113-201ENSMUST00000119280 836 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm25224-201ENSMUST00000158195 68 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm25360-201ENSMUST00000178786 191 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm28623-201ENSMUST00000187219 192 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm29576-201ENSMUST00000188020 678 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm18775-201ENSMUST00000190763 586 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm28354-201ENSMUST00000190904 678 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm43489-201ENSMUST00000196810 993 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm43217-201ENSMUST00000199513 367 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm43232-201ENSMUST00000201346 364 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm44208-201ENSMUST00000205199 421 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm9370-201ENSMUST00000222787 609 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm25792-201ENSMUST00000083289 100 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 AF357428-201ENSMUST00000083815 69 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb2S4R1M3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm12814-201ENSMUST00000117091 846 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm14627-201ENSMUST00000118931 567 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm11357-201ENSMUST00000119758 954 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm6587-201ENSMUST00000120219 613 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm14101-201ENSMUST00000121502 473 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm14578-201ENSMUST00000122166 391 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm23118-201ENSMUST00000122657 187 ntBASIC2.84□□□□□ -1.95
H2afb2S4R1M3 Gm23212-201ENSMUST00000122718 60 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms