Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir208b-201ENSMUST00000104735 77 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm12889-201ENSMUST00000118684 241 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm15183-201ENSMUST00000118933 348 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm13862-201ENSMUST00000121220 197 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm13676-201ENSMUST00000122185 591 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm14368-201ENSMUST00000145305 415 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm25883-201ENSMUST00000157781 271 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm43096-201ENSMUST00000196173 421 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm17935-201ENSMUST00000196649 772 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Mir693-201ENSMUST00000102187 89 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm13471-201ENSMUST00000122057 433 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm15116-201ENSMUST00000122248 663 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm17655-201ENSMUST00000167969 255 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm25699-201ENSMUST00000082896 167 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm22723-201ENSMUST00000083820 129 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn4aQ9ER60 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.22□□□□□ -1.89
Scn4aQ9ER60 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm22107-201ENSMUST00000122548 100 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm23702-201ENSMUST00000158840 130 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm23267-201ENSMUST00000178490 132 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm45588-201ENSMUST00000211213 630 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Mir421-201ENSMUST00000083575 76 ntBASIC3.21□□□□□ -1.89
Scn4aQ9ER60 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm14677-201ENSMUST00000117866 486 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm14795-201ENSMUST00000118461 471 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm4732-201ENSMUST00000118778 473 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm12372-201ENSMUST00000121654 768 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm25044-201ENSMUST00000158603 104 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm27964-201ENSMUST00000185195 62 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Gm45530-201ENSMUST00000211658 225 ntBASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn4aQ9ER60 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm13603-201ENSMUST00000119404 83 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm26024-201ENSMUST00000158657 322 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm6486-201ENSMUST00000166202 434 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm22716-201ENSMUST00000177596 107 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm28650-201ENSMUST00000188413 411 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm35570-201ENSMUST00000198730 681 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm19252-201ENSMUST00000204705 305 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn4aQ9ER60 Gm24951-201ENSMUST00000102182 109 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm23409-201ENSMUST00000158516 237 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Trbv22-201ENSMUST00000191697 291 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm24890-201ENSMUST00000104389 102 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm14989-201ENSMUST00000120497 207 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms