Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm24254-201ENSMUST00000083702 104 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdc40Q9DC48 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm26247-201ENSMUST00000116702 91 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm22072-201ENSMUST00000116850 121 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm15936-201ENSMUST00000118706 460 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm13581-201ENSMUST00000120675 278 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm7327-201ENSMUST00000120925 652 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm12155-201ENSMUST00000121267 160 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm24443-201ENSMUST00000157242 132 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm22330-201ENSMUST00000158068 115 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cdc40Q9DC48 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm24111-201ENSMUST00000175491 97 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm20656-201ENSMUST00000176925 518 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm25528-201ENSMUST00000180264 132 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm27379-201ENSMUST00000183730 123 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Mir8103-201ENSMUST00000183945 107 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm7837-201ENSMUST00000190873 412 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm37989-201ENSMUST00000195202 803 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm18982-201ENSMUST00000198118 529 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cdc40Q9DC48 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm45614-201ENSMUST00000209994 721 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm7422-201ENSMUST00000220115 640 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm23932-201ENSMUST00000082914 107 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm25403-201ENSMUST00000082971 143 ntBASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdc40Q9DC48 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdc40Q9DC48 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm23128-201ENSMUST00000104257 132 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm25526-201ENSMUST00000104332 132 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm14566-201ENSMUST00000118915 321 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm14238-201ENSMUST00000120227 323 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm12368-201ENSMUST00000122251 434 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm24840-201ENSMUST00000122603 147 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm25153-201ENSMUST00000157118 156 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm24736-201ENSMUST00000158862 130 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm17061-201ENSMUST00000163167 499 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm25476-201ENSMUST00000175125 185 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm25470-201ENSMUST00000175576 111 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm6651-201ENSMUST00000189471 271 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm23128-202ENSMUST00000196578 133 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm44615-201ENSMUST00000206548 358 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cdc40Q9DC48 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdc40Q9DC48 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.53□□□□□ -2
Cdc40Q9DC48 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdc40Q9DC48 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm14020-201ENSMUST00000118165 662 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm14469-201ENSMUST00000118363 202 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm14669-201ENSMUST00000118841 250 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm15103-201ENSMUST00000119893 871 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 DQ267100-201ENSMUST00000122600 72 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm22563-201ENSMUST00000157333 269 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm23895-201ENSMUST00000158108 160 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm23409-201ENSMUST00000158516 237 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm3104-201ENSMUST00000171004 473 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm20648-201ENSMUST00000175815 328 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm19202-201ENSMUST00000198096 808 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm44954-201ENSMUST00000208513 227 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm45530-201ENSMUST00000211658 225 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms