Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43415-201ENSMUST00000201934 750 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm35931-201ENSMUST00000203931 448 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm15526-201ENSMUST00000112504 204 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm11698-201ENSMUST00000117948 455 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm15211-201ENSMUST00000118932 528 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm14303-201ENSMUST00000121320 171 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm22107-201ENSMUST00000122548 100 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm22113-201ENSMUST00000158343 104 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Snora15-201ENSMUST00000177461 131 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm30280-201ENSMUST00000192214 262 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm7871-201ENSMUST00000195346 618 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm9402-201ENSMUST00000196849 388 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm25203-202ENSMUST00000200458 216 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Clp1Q99LI9 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm10916-201ENSMUST00000080330 483 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm25203-201ENSMUST00000082842 215 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Clp1Q99LI9 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.92□□□□□ -1.62
Clp1Q99LI9 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm12683-201ENSMUST00000117528 415 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm12893-201ENSMUST00000121732 275 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm25220-201ENSMUST00000157546 95 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm24818-201ENSMUST00000175093 161 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm27997-201ENSMUST00000184942 69 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm29610-201ENSMUST00000187749 453 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm37801-201ENSMUST00000194754 274 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm44881-201ENSMUST00000205425 367 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm18306-201ENSMUST00000207338 569 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm25257-201ENSMUST00000083907 110 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.91□□□□□ -1.62
Clp1Q99LI9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Clp1Q99LI9 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.9□□□□□ -1.62
Clp1Q99LI9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Clp1Q99LI9 Gm26367-201ENSMUST00000104165 132 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm24079-201ENSMUST00000104352 132 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm15981-201ENSMUST00000119196 457 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm26101-201ENSMUST00000157246 105 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm25054-201ENSMUST00000157370 97 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm22814-201ENSMUST00000157452 104 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm22219-201ENSMUST00000157562 319 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm24858-201ENSMUST00000158058 323 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm23258-201ENSMUST00000158319 106 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm24224-201ENSMUST00000158828 258 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm17187-201ENSMUST00000164622 410 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm20698-201ENSMUST00000175657 233 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms