Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm24987-201ENSMUST00000104453 134 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13831-201ENSMUST00000118764 302 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13419-201ENSMUST00000121711 271 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm22107-201ENSMUST00000122548 100 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm22561-201ENSMUST00000157331 84 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm24439-201ENSMUST00000157894 117 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm25066-201ENSMUST00000158145 123 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm23016-201ENSMUST00000158431 62 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm25977-201ENSMUST00000158697 85 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm37431-201ENSMUST00000195102 111 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm44703-201ENSMUST00000205724 248 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm45105-201ENSMUST00000207824 397 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm23443-201ENSMUST00000082916 128 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm22834-201ENSMUST00000102021 79 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm22936-201ENSMUST00000103955 126 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm12806-201ENSMUST00000119384 268 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm23078-201ENSMUST00000157848 148 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm8338-201ENSMUST00000163928 363 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm24713-201ENSMUST00000178850 107 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm25448-201ENSMUST00000180065 107 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm29490-201ENSMUST00000190923 342 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm37603-201ENSMUST00000192368 219 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm37239-201ENSMUST00000193510 141 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm38019-201ENSMUST00000195133 380 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm43624-201ENSMUST00000197368 180 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm43039-201ENSMUST00000202883 963 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm45031-201ENSMUST00000206800 288 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm7675-201ENSMUST00000208828 686 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm23925-201ENSMUST00000082471 132 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm25200-201ENSMUST00000083094 130 ntBASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ushbp1Q8R370 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm22497-201ENSMUST00000104499 131 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm24275-201ENSMUST00000116780 146 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm14537-201ENSMUST00000117464 599 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm15112-201ENSMUST00000120152 860 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm8244-201ENSMUST00000121254 264 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm14736-201ENSMUST00000121470 336 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm11403-201ENSMUST00000122195 369 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm23168-201ENSMUST00000157156 143 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm23084-201ENSMUST00000157850 114 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm22136-201ENSMUST00000158751 268 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm24757-201ENSMUST00000176987 371 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm4761-201ENSMUST00000178086 582 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm38332-201ENSMUST00000194189 147 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Mir7682-201ENSMUST00000198467 58 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm7041-201ENSMUST00000201227 524 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm45553-201ENSMUST00000209929 507 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm8785-201ENSMUST00000220259 487 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm23627-201ENSMUST00000082459 107 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm22502-201ENSMUST00000082488 107 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Gm24149-201ENSMUST00000082757 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms