Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm29097-201ENSMUST00000190273 422 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm36259-201ENSMUST00000197340 392 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm19243-201ENSMUST00000198592 269 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm45327-201ENSMUST00000211612 565 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm26164-201ENSMUST00000083793 104 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm7308-201ENSMUST00000121087 447 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm23554-201ENSMUST00000157818 110 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm24191-201ENSMUST00000157977 122 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm24862-201ENSMUST00000179103 79 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm23310-201ENSMUST00000179105 79 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm25461-201ENSMUST00000179293 79 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm29062-201ENSMUST00000186032 694 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm29192-201ENSMUST00000190942 377 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm8790-201ENSMUST00000194108 322 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm20039-201ENSMUST00000210329 394 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm18016-201ENSMUST00000216119 801 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Snora23-201ENSMUST00000082517 184 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm22155-201ENSMUST00000083836 162 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.92□□□□□ -1.62
Trim56Q80VI1 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim56Q80VI1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm14841-201ENSMUST00000121067 758 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm14473-201ENSMUST00000122269 557 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm25104-201ENSMUST00000122476 163 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm5963-201ENSMUST00000143451 236 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm26983-201ENSMUST00000182051 388 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm27699-201ENSMUST00000183553 180 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Mir6355-201ENSMUST00000183687 106 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm27695-201ENSMUST00000184301 91 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm45207-201ENSMUST00000207469 145 ntBASIC4.91□□□□□ -1.62
Trim56Q80VI1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim56Q80VI1 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.9□□□□□ -1.62
Trim56Q80VI1 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.9□□□□□ -1.62
Trim56Q80VI1 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim56Q80VI1 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.9□□□□□ -1.62
Trim56Q80VI1 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.9□□□□□ -1.62
Trim56Q80VI1 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Trim56Q80VI1 Mir551b-201ENSMUST00000102165 98 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm14657-201ENSMUST00000117461 302 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm12785-201ENSMUST00000122052 172 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm14298-201ENSMUST00000139032 237 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm16356-201ENSMUST00000143300 169 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Mir3620-201ENSMUST00000184710 61 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm27608-201ENSMUST00000184822 162 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm27624-201ENSMUST00000185047 177 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm8296-201ENSMUST00000185597 524 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm32340-201ENSMUST00000192883 259 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm37029-201ENSMUST00000195773 239 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm44650-201ENSMUST00000206929 194 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm44811-201ENSMUST00000209120 228 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms