Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm25507-201ENSMUST00000116981 144 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm12025-201ENSMUST00000117768 144 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm11784-201ENSMUST00000118568 474 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm23592-201ENSMUST00000157859 117 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm24438-201ENSMUST00000157893 115 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm42475-201ENSMUST00000201212 295 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm2676-201ENSMUST00000207279 606 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm4921-201ENSMUST00000219804 992 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Mir21a-201ENSMUST00000083521 92 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 AF357428-201ENSMUST00000083815 69 ntBASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Smarca1Q6PGB8 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm23530-201ENSMUST00000104564 137 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm14811-201ENSMUST00000117070 117 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm14973-201ENSMUST00000117248 255 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm11576-201ENSMUST00000117433 417 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm14362-201ENSMUST00000121679 273 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm12368-201ENSMUST00000122251 434 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm15254-201ENSMUST00000149567 273 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm25902-201ENSMUST00000158493 318 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm24552-201ENSMUST00000158646 103 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm17162-201ENSMUST00000168538 473 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm22290-201ENSMUST00000177655 107 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm22583-201ENSMUST00000178031 107 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm26652-202ENSMUST00000181672 475 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Mir6914-201ENSMUST00000184999 69 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm19089-201ENSMUST00000197207 613 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm43804-201ENSMUST00000198280 456 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm19147-201ENSMUST00000199622 652 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm45387-201ENSMUST00000209792 632 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm22229-201ENSMUST00000082987 108 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm24533-201ENSMUST00000083138 196 ntBASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Smarca1Q6PGB8 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm23609-201ENSMUST00000104542 127 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm14049-201ENSMUST00000121009 636 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm14766-201ENSMUST00000121689 367 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm25637-201ENSMUST00000157529 107 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm15946-201ENSMUST00000160654 423 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm23053-201ENSMUST00000175136 96 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm28141-201ENSMUST00000186676 342 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm29950-201ENSMUST00000195273 237 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm37290-201ENSMUST00000195775 339 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm6510-201ENSMUST00000195916 574 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm35405-201ENSMUST00000218754 400 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm23297-201ENSMUST00000083184 127 ntBASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smarca1Q6PGB8 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm14657-201ENSMUST00000117461 302 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm7123-201ENSMUST00000117647 213 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm14293-201ENSMUST00000118528 577 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm22597-201ENSMUST00000157602 80 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm22849-201ENSMUST00000157713 307 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm17538-201ENSMUST00000168236 327 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm24713-201ENSMUST00000178850 107 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm21758-201ENSMUST00000179336 819 ntBASIC3.77□□□□□ -1.81
Smarca1Q6PGB8 Gm25448-201ENSMUST00000180065 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms