Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24125-201ENSMUST00000104105 137 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm11673-201ENSMUST00000117846 331 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm11698-201ENSMUST00000117948 455 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm15603-201ENSMUST00000119252 492 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22514-201ENSMUST00000122547 308 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm6969-201ENSMUST00000140065 342 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25654-201ENSMUST00000158467 88 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm10075-201ENSMUST00000162030 545 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm19898-201ENSMUST00000177490 251 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Mir6393-201ENSMUST00000183709 94 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm20257-202ENSMUST00000188643 130 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45498-201ENSMUST00000210346 283 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45651-201ENSMUST00000210857 335 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23455-201ENSMUST00000083331 100 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Mir471-201ENSMUST00000093596 67 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm15206-201ENSMUST00000119143 454 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm11600-201ENSMUST00000119592 240 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm13729-201ENSMUST00000120328 406 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24629-201ENSMUST00000122762 89 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm26098-201ENSMUST00000157247 288 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22145-201ENSMUST00000157396 148 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23023-201ENSMUST00000158767 109 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Mir3104-201ENSMUST00000174911 63 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm26501-201ENSMUST00000178307 107 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24168-201ENSMUST00000178825 107 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm8599-201ENSMUST00000193033 457 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm26446-201ENSMUST00000082455 103 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22704-201ENSMUST00000083027 137 ntBASIC4.59□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
Sh3rf1Q69ZI1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Svet1-201ENSMUST00000209370 3940 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Mir599-201ENSMUST00000102378 88 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm24124-201ENSMUST00000104103 132 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm26018-201ENSMUST00000104406 128 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm15752-201ENSMUST00000117427 394 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm12062-201ENSMUST00000117533 259 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm12112-201ENSMUST00000117772 231 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm14971-201ENSMUST00000117980 663 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm14878-201ENSMUST00000118167 293 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm15223-201ENSMUST00000120989 826 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm22378-201ENSMUST00000157481 111 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm23906-201ENSMUST00000157573 128 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm3191-201ENSMUST00000167139 346 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm27568-201ENSMUST00000184220 99 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Mir6975-201ENSMUST00000184879 61 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm5372-201ENSMUST00000187540 409 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm3145-201ENSMUST00000188584 220 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm29097-201ENSMUST00000190273 422 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37670-201ENSMUST00000193622 229 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37167-201ENSMUST00000194946 396 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm44816-201ENSMUST00000206666 477 ntBASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms