Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 AC124729.1-202ENSMUST00000225587 938 ntBASIC1.37□□□□□ -2.19
Col7a1Q63870 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.37□□□□□ -2.19
Col7a1Q63870 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.37□□□□□ -2.19
Col7a1Q63870 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.37□□□□□ -2.19
Col7a1Q63870 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col7a1Q63870 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.37□□□□□ -2.19
Col7a1Q63870 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm6373-201ENSMUST00000121026 360 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm25958-201ENSMUST00000175114 71 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Mir7663-201ENSMUST00000183950 61 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm17872-201ENSMUST00000222550 532 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Mir8103-201ENSMUST00000183945 107 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC1.36□□□□□ -2.19
Col7a1Q63870 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.36□□□□□ -2.19
Col7a1Q63870 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm14988-201ENSMUST00000117224 1548 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.36□□□□□ -2.19
Col7a1Q63870 Snora69-201ENSMUST00000083708 131 ntBASIC1.36□□□□□ -2.19
Col7a1Q63870 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm13687-201ENSMUST00000119857 282 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm12880-201ENSMUST00000120652 494 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm15267-201ENSMUST00000120888 464 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm23960-201ENSMUST00000157206 131 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm9068-201ENSMUST00000217393 455 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.35□□□□□ -2.19
Col7a1Q63870 Gm14469-201ENSMUST00000118363 202 ntBASIC1.34□□□□□ -2.19
Col7a1Q63870 Gm15244-201ENSMUST00000121122 130 ntBASIC1.34□□□□□ -2.19
Col7a1Q63870 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC1.34□□□□□ -2.19
Col7a1Q63870 Gm6801-201ENSMUST00000190697 339 ntBASIC1.34□□□□□ -2.19
Col7a1Q63870 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.34□□□□□ -2.19
Col7a1Q63870 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Col7a1Q63870 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col7a1Q63870 Gm23642-201ENSMUST00000157858 258 ntBASIC1.34□□□□□ -2.2
Col7a1Q63870 Gm25971-201ENSMUST00000158953 286 ntBASIC1.34□□□□□ -2.2
Col7a1Q63870 Gm17062-201ENSMUST00000166987 461 ntBASIC1.34□□□□□ -2.2
Col7a1Q63870 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.34□□□□□ -2.2
Col7a1Q63870 Gm20039-201ENSMUST00000210329 394 ntBASIC1.34□□□□□ -2.2
Col7a1Q63870 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.34□□□□□ -2.2
Col7a1Q63870 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm23137-201ENSMUST00000157559 107 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Col7a1Q63870 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Snord21-201ENSMUST00000082519 94 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm23126-201ENSMUST00000104260 134 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col7a1Q63870 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col7a1Q63870 Mir6540-201ENSMUST00000184886 108 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm45048-201ENSMUST00000207058 429 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.33□□□□□ -2.2
Col7a1Q63870 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.33□□□□□ -2.2
Col7a1Q63870 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC1.33□□□□□ -2.2
Col7a1Q63870 AC133598.4-202ENSMUST00000225267 469 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.33□□□□□ -2.2
Col7a1Q63870 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Col7a1Q63870 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm12313-201ENSMUST00000121347 421 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Col7a1Q63870 Mir7079-201ENSMUST00000184697 69 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm28383-201ENSMUST00000187563 139 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Gm29262-201ENSMUST00000190084 196 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.33□□□□□ -2.2
Col7a1Q63870 AC158631.1-201ENSMUST00000219202 138 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 AC154329.2-201ENSMUST00000225257 383 ntBASIC1.33□□□□□ -2.2
Col7a1Q63870 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm22083-201ENSMUST00000157586 102 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm3102-201ENSMUST00000164236 489 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm44052-201ENSMUST00000203382 396 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm12386-201ENSMUST00000117380 688 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm22665-201ENSMUST00000158720 275 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.32□□□□□ -2.2
Col7a1Q63870 CT572983.1-201ENSMUST00000226895 514 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col7a1Q63870 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm24252-201ENSMUST00000083700 132 ntBASIC1.32□□□□□ -2.2
Col7a1Q63870 Gm43379-201ENSMUST00000196253 7726 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms