Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm45678-201ENSMUST00000210509 295 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 AC161256.1-201ENSMUST00000217312 213 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm24042-201ENSMUST00000083114 103 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm23451-201ENSMUST00000083328 122 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm21032-201ENSMUST00000208108 2578 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm22473-201ENSMUST00000104114 132 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm12805-201ENSMUST00000117305 1048 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm27579-201ENSMUST00000158113 63 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm27952-201ENSMUST00000184748 105 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm29397-201ENSMUST00000185205 333 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm29064-201ENSMUST00000187014 813 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm34073-201ENSMUST00000195736 212 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm2522-201ENSMUST00000204280 322 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Olfr1285-201ENSMUST00000208523 903 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm8940-201ENSMUST00000212585 219 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Gm10222-201ENSMUST00000088336 294 ntBASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Scaf1Q5U4C3 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC6.21□□□□□ -1.41
Scaf1Q5U4C3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Scaf1Q5U4C3 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC6.21□□□□□ -1.41
Scaf1Q5U4C3 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.21□□□□□ -1.41
Scaf1Q5U4C3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Scaf1Q5U4C3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm23014-201ENSMUST00000104144 130 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm23178-201ENSMUST00000116782 95 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm11698-201ENSMUST00000117948 455 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm13687-201ENSMUST00000119857 282 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm12087-201ENSMUST00000121878 258 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm24501-201ENSMUST00000158452 62 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm25486-201ENSMUST00000158726 63 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm24264-201ENSMUST00000179835 94 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm27834-201ENSMUST00000183427 125 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Mir6383-201ENSMUST00000184545 116 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm45365-201ENSMUST00000209489 256 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Gm23055-201ENSMUST00000082805 94 ntBASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scaf1Q5U4C3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm23142-201ENSMUST00000101848 105 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm26240-201ENSMUST00000101893 105 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm27510-201ENSMUST00000158214 64 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm23759-201ENSMUST00000158351 268 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm17159-201ENSMUST00000169043 482 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm6214-201ENSMUST00000178845 541 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Gm44521-201ENSMUST00000206469 217 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scaf1Q5U4C3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 AC158921.1-201ENSMUST00000227861 3468 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm25565-201ENSMUST00000104605 105 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms