Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Gm46994-201ENSMUST00000221523 219 ntBASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Gm5955-201ENSMUST00000222712 219 ntBASIC3.61□□□□□ -1.83
Vps54Q5SPW0 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps54Q5SPW0 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm13511-201ENSMUST00000121167 363 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm23380-201ENSMUST00000158448 103 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm6651-201ENSMUST00000189471 271 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm37692-201ENSMUST00000192633 232 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm45400-201ENSMUST00000211603 653 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm26206-201ENSMUST00000082908 110 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps54Q5SPW0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm25539-201ENSMUST00000116886 122 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm11490-201ENSMUST00000118128 272 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm9043-201ENSMUST00000119677 314 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm13356-201ENSMUST00000121678 335 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm23212-201ENSMUST00000122718 60 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm25360-201ENSMUST00000178786 191 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm27599-201ENSMUST00000183758 174 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm5268-201ENSMUST00000189212 940 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm45590-201ENSMUST00000209715 262 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm18414-201ENSMUST00000210858 694 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm20304-201ENSMUST00000218168 444 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm23615-201ENSMUST00000082602 65 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.59□□□□□ -1.83
Vps54Q5SPW0 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.59□□□□□ -1.84
Vps54Q5SPW0 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Vps54Q5SPW0 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.59□□□□□ -1.84
Vps54Q5SPW0 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm23175-201ENSMUST00000104371 132 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm12225-201ENSMUST00000117995 298 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm15231-201ENSMUST00000119174 447 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm26027-201ENSMUST00000122725 268 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm11392-201ENSMUST00000181419 710 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Mir6382-201ENSMUST00000184055 110 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm29576-201ENSMUST00000188020 678 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm28354-201ENSMUST00000190904 678 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm36984-201ENSMUST00000192770 235 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm24350-202ENSMUST00000198309 132 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm43198-201ENSMUST00000200927 326 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm45049-201ENSMUST00000207586 591 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps54Q5SPW0 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Gm24150-201ENSMUST00000082759 104 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Mir19a-201ENSMUST00000083482 82 ntBASIC3.58□□□□□ -1.84
Vps54Q5SPW0 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Mir499-201ENSMUST00000102357 79 ntBASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Gm25876-201ENSMUST00000104329 119 ntBASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Gm14428-201ENSMUST00000120408 822 ntBASIC3.57□□□□□ -1.84
Vps54Q5SPW0 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms