Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm27369-201ENSMUST00000185182 71 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.6□□□□□ -1.99
Trav8d-2Q5R1B6 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm14943-201ENSMUST00000118056 546 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm12891-201ENSMUST00000119358 240 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm14898-201ENSMUST00000120202 645 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm15536-201ENSMUST00000121411 114 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm20648-201ENSMUST00000175815 328 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm27220-201ENSMUST00000183453 262 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Mir6383-201ENSMUST00000184545 116 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm2719-201ENSMUST00000191929 444 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm45614-201ENSMUST00000209994 721 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm5374-201ENSMUST00000222868 657 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Gm10038-201ENSMUST00000077233 441 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 AF357341-201ENSMUST00000083088 75 ntBASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav8d-2Q5R1B6 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Trav8d-2Q5R1B6 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.59□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm14358-201ENSMUST00000118458 403 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm11363-201ENSMUST00000121672 548 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm23463-201ENSMUST00000122468 99 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm22257-201ENSMUST00000158687 301 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm29330-201ENSMUST00000190032 699 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm28098-201ENSMUST00000191361 699 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm43600-201ENSMUST00000202134 223 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm29920-201ENSMUST00000206876 754 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm45879-201ENSMUST00000212521 392 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Gm31849-201ENSMUST00000220306 375 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Snora23-201ENSMUST00000082517 184 ntBASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav8d-2Q5R1B6 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm14448-201ENSMUST00000116383 210 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm12782-201ENSMUST00000117519 727 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm13454-201ENSMUST00000118166 483 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm12515-201ENSMUST00000120116 361 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm12706-201ENSMUST00000121588 698 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm22957-201ENSMUST00000122511 123 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm23183-201ENSMUST00000122595 323 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm23213-201ENSMUST00000122715 313 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm24532-201ENSMUST00000157951 286 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm23473-201ENSMUST00000158883 116 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm27161-201ENSMUST00000183960 562 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm29288-201ENSMUST00000191582 901 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm37428-201ENSMUST00000193886 137 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms