Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mir1892-201ENSMUST00000197752 80 ntBASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm12782-201ENSMUST00000117519 727 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm7209-201ENSMUST00000122339 333 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm23583-201ENSMUST00000158533 289 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm24863-201ENSMUST00000179499 107 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm5471-201ENSMUST00000072732 337 ntBASIC2.84□□□□□ -1.96
Ccdc88bQ4QRL3 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Gm26181-201ENSMUST00000157687 106 ntBASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc88bQ4QRL3 Gm13614-201ENSMUST00000117306 503 ntBASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Gm11577-201ENSMUST00000118030 737 ntBASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Gm2389-201ENSMUST00000160487 189 ntBASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ccdc88bQ4QRL3 Gm6923-201ENSMUST00000118343 406 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Gm24154-201ENSMUST00000175261 130 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Mir1954-201ENSMUST00000175595 86 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Gm29552-201ENSMUST00000190548 660 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc88bQ4QRL3 Gm15106-201ENSMUST00000119691 821 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm11438-201ENSMUST00000121582 189 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm24288-201ENSMUST00000157630 144 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm3496-201ENSMUST00000188283 745 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm29475-201ENSMUST00000190767 312 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm43954-201ENSMUST00000204634 544 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr815-201ENSMUST00000071557 951 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm24624-201ENSMUST00000082617 164 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Gm37311-201ENSMUST00000195541 2024 ntBASIC2.8□□□□□ -1.96
Ccdc88bQ4QRL3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Mir320-201ENSMUST00000083594 82 ntBASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc88bQ4QRL3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Gm13153-201ENSMUST00000120969 637 ntBASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Gm15065-201ENSMUST00000121699 273 ntBASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Gm43198-201ENSMUST00000200927 326 ntBASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Gm45034-201ENSMUST00000206831 482 ntBASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ccdc88bQ4QRL3 Gm15951-201ENSMUST00000118377 400 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm14215-201ENSMUST00000120578 221 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm24174-201ENSMUST00000158933 111 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm3102-201ENSMUST00000164236 489 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm17153-201ENSMUST00000171314 490 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm27656-201ENSMUST00000185055 80 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 Gm43224-201ENSMUST00000201567 898 ntBASIC2.77□□□□□ -1.97
Ccdc88bQ4QRL3 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms