Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm37576-201ENSMUST00000194228 372 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm42818-201ENSMUST00000198869 987 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm44161-201ENSMUST00000203532 253 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm45522-201ENSMUST00000210784 166 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Platr25-208ENSMUST00000222602 939 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm26494-201ENSMUST00000083154 143 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm24493-201ENSMUST00000083805 143 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.61□□□□□ -1.99
Upf3bQ3ULL6 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm14731-201ENSMUST00000119216 376 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm12640-201ENSMUST00000120097 310 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm1989-201ENSMUST00000126244 636 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm22390-201ENSMUST00000157588 325 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm24532-201ENSMUST00000157951 286 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm22534-201ENSMUST00000158173 104 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm22764-201ENSMUST00000158370 92 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm25120-201ENSMUST00000180148 79 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm3852-201ENSMUST00000182781 264 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Mir7062-201ENSMUST00000185038 66 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm6060-201ENSMUST00000188671 251 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm6801-201ENSMUST00000190697 339 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm45551-201ENSMUST00000211459 928 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 Gm18026-201ENSMUST00000222789 727 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.6□□□□□ -1.99
Upf3bQ3ULL6 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm13756-201ENSMUST00000117618 222 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm14940-201ENSMUST00000119309 495 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm13424-201ENSMUST00000122301 354 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm23980-201ENSMUST00000157135 158 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm24816-201ENSMUST00000175311 151 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm24757-201ENSMUST00000176987 371 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm27582-201ENSMUST00000184084 126 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Mir7081-201ENSMUST00000184490 75 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm18982-201ENSMUST00000198118 529 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm43626-201ENSMUST00000198575 162 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm18410-201ENSMUST00000207199 577 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm8031-201ENSMUST00000213430 626 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm25799-201ENSMUST00000082643 107 ntBASIC2.59□□□□□ -1.99
Upf3bQ3ULL6 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf3bQ3ULL6 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm22782-201ENSMUST00000104082 132 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm26473-201ENSMUST00000116763 127 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm15176-201ENSMUST00000117734 135 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm25866-201ENSMUST00000158245 112 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm26365-201ENSMUST00000179177 94 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm28900-201ENSMUST00000185232 156 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.58□□□□□ -2
Upf3bQ3ULL6 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm23452-201ENSMUST00000083327 107 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm25126-201ENSMUST00000083343 102 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.58□□□□□ -2
Upf3bQ3ULL6 Gm22752-201ENSMUST00000102083 109 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm12793-201ENSMUST00000119268 292 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm13541-201ENSMUST00000119519 283 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Snrpert-201ENSMUST00000121967 279 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.57□□□□□ -2
Upf3bQ3ULL6 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm25979-201ENSMUST00000157177 138 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms