Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm37732-201ENSMUST00000194377 316 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm38019-201ENSMUST00000195133 380 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm9370-201ENSMUST00000222787 609 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm24611-201ENSMUST00000083272 107 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm25792-201ENSMUST00000083289 100 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rnf180Q3U827 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf180Q3U827 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.61□□□□□ -1.67
Rnf180Q3U827 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rnf180Q3U827 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.61□□□□□ -1.67
Rnf180Q3U827 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm23766-201ENSMUST00000103894 80 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm11221-201ENSMUST00000117230 597 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm11367-201ENSMUST00000117802 120 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm11813-201ENSMUST00000118586 291 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm14627-201ENSMUST00000118931 567 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm12294-201ENSMUST00000119723 490 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm23016-201ENSMUST00000158431 62 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm26215-201ENSMUST00000158584 139 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm20656-201ENSMUST00000176925 518 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm27733-201ENSMUST00000184803 68 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm28069-201ENSMUST00000189926 214 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm7182-201ENSMUST00000193351 732 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm46233-201ENSMUST00000217831 449 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm20102-201ENSMUST00000222445 220 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm23615-201ENSMUST00000082602 65 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm22155-201ENSMUST00000083836 162 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm25821-201ENSMUST00000093657 133 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.6□□□□□ -1.67
Rnf180Q3U827 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf180Q3U827 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm25485-201ENSMUST00000104120 132 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Snord70-201ENSMUST00000104157 87 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm22674-201ENSMUST00000104413 131 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm9157-201ENSMUST00000117673 225 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm14681-201ENSMUST00000118047 411 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm12787-201ENSMUST00000119234 396 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm24937-201ENSMUST00000122597 134 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm25290-201ENSMUST00000122796 144 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm24192-201ENSMUST00000157978 145 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm25714-201ENSMUST00000158626 296 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm19126-201ENSMUST00000207896 509 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.59□□□□□ -1.67
Rnf180Q3U827 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf180Q3U827 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rnf180Q3U827 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Rnf180Q3U827 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf180Q3U827 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf180Q3U827 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.59□□□□□ -1.68
Rnf180Q3U827 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.59□□□□□ -1.68
Rnf180Q3U827 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm9078-201ENSMUST00000119126 617 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm14765-201ENSMUST00000121954 326 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm25827-201ENSMUST00000157089 107 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm22945-201ENSMUST00000158557 157 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm27828-201ENSMUST00000184108 119 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm27477-201ENSMUST00000184649 143 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm27385-201ENSMUST00000184747 104 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm28118-201ENSMUST00000185957 294 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm28299-201ENSMUST00000189908 339 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm44261-201ENSMUST00000203337 209 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm45614-201ENSMUST00000209994 721 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms