Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Gm23093-201ENSMUST00000083450 102 ntBASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.58□□□□□ -1.68
Ddb1Q3U1J4 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm26100-201ENSMUST00000157245 127 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm23332-201ENSMUST00000157424 275 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm25434-201ENSMUST00000158278 167 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Mir7050-201ENSMUST00000184636 60 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm28282-201ENSMUST00000186072 186 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm29335-201ENSMUST00000188361 459 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm37085-201ENSMUST00000193780 196 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm46194-201ENSMUST00000218136 320 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm10264-201ENSMUST00000220589 429 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 mt-Td-201ENSMUST00000082404 70 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Gm23378-201ENSMUST00000082942 107 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ddb1Q3U1J4 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm5287-201ENSMUST00000120666 598 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm14049-201ENSMUST00000121009 636 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm14804-201ENSMUST00000122322 508 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm13868-201ENSMUST00000122411 294 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm22769-201ENSMUST00000158367 98 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm22290-201ENSMUST00000177655 107 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm22583-201ENSMUST00000178031 107 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm24100-201ENSMUST00000178592 79 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm24137-201ENSMUST00000180055 79 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm22391-201ENSMUST00000180356 79 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm43155-201ENSMUST00000202661 494 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 BC051076-202ENSMUST00000199477 2868 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ddb1Q3U1J4 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm22195-201ENSMUST00000116861 108 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm14670-201ENSMUST00000117327 337 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm14008-201ENSMUST00000120483 274 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm23791-201ENSMUST00000122553 293 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm25970-201ENSMUST00000157165 86 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Mir6951-201ENSMUST00000183910 75 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm7039-201ENSMUST00000205138 346 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm25792-201ENSMUST00000083289 100 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm26121-201ENSMUST00000083364 162 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ddb1Q3U1J4 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm12722-201ENSMUST00000118507 493 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm14307-201ENSMUST00000118930 291 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm14574-201ENSMUST00000120644 279 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm11430-201ENSMUST00000121317 217 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm14297-201ENSMUST00000129110 291 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm22034-201ENSMUST00000157283 134 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms