Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm25960-201ENSMUST00000175110 125 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm44453-201ENSMUST00000175161 126 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm22716-201ENSMUST00000177596 107 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm25195-201ENSMUST00000177656 126 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm23047-201ENSMUST00000177661 94 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm26426-201ENSMUST00000177866 123 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm25194-201ENSMUST00000177987 79 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm22307-201ENSMUST00000180019 107 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm26060-201ENSMUST00000180094 123 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm6947-201ENSMUST00000186254 78 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm29229-201ENSMUST00000188874 323 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm21088-201ENSMUST00000190875 316 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm43601-201ENSMUST00000196294 945 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm42828-201ENSMUST00000199669 469 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm24626-201ENSMUST00000082621 161 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm23515-201ENSMUST00000082829 107 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm23679-201ENSMUST00000083161 119 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Olfr203-201ENSMUST00000089305 924 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Olfr713-201ENSMUST00000098139 975 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col28a1Q2UY11 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.59□□□□□ -1.84
Col28a1Q2UY11 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col28a1Q2UY11 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col28a1Q2UY11 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col28a1Q2UY11 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm13228-201ENSMUST00000118937 634 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm22597-201ENSMUST00000157602 80 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm23579-201ENSMUST00000158528 103 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm22136-201ENSMUST00000158751 268 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Mir6385-201ENSMUST00000184295 105 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28781-201ENSMUST00000185760 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28339-201ENSMUST00000185845 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm29062-201ENSMUST00000186032 694 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm29574-201ENSMUST00000186226 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28828-201ENSMUST00000186601 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28057-201ENSMUST00000186603 615 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28255-201ENSMUST00000187101 694 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm29307-201ENSMUST00000187367 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28896-201ENSMUST00000188609 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm29339-201ENSMUST00000189613 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm7858-201ENSMUST00000190177 622 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm28159-201ENSMUST00000190296 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm5731-201ENSMUST00000190969 481 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm29407-201ENSMUST00000191468 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm18403-201ENSMUST00000192907 529 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm37616-201ENSMUST00000193974 322 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm38107-201ENSMUST00000194873 696 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm43115-201ENSMUST00000196244 160 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm36382-201ENSMUST00000198892 541 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm43424-201ENSMUST00000200484 253 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm44870-201ENSMUST00000207291 357 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm45387-201ENSMUST00000209792 632 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm17829-201ENSMUST00000219782 344 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm8785-201ENSMUST00000220259 487 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm5265-201ENSMUST00000076828 342 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm23443-201ENSMUST00000082916 128 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm25200-201ENSMUST00000083094 130 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm24764-201ENSMUST00000083686 199 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col28a1Q2UY11 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm22834-201ENSMUST00000102021 79 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm22021-201ENSMUST00000104353 107 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm15783-201ENSMUST00000117521 633 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm13085-201ENSMUST00000118356 171 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm13122-201ENSMUST00000118380 453 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm13314-201ENSMUST00000118742 335 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.57□□□□□ -1.84
Col28a1Q2UY11 Gm14129-201ENSMUST00000122436 291 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms