Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm23472-201ENSMUST00000101806 191 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm22658-201ENSMUST00000104196 155 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm25728-201ENSMUST00000104525 159 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm14607-201ENSMUST00000119119 491 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm22561-201ENSMUST00000157331 84 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm3025-201ENSMUST00000163454 489 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm2878-201ENSMUST00000170173 486 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Mir5136-201ENSMUST00000175573 76 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm24497-201ENSMUST00000177868 191 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm25939-201ENSMUST00000179876 191 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm29524-201ENSMUST00000190819 699 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm31520-201ENSMUST00000203048 733 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm44404-201ENSMUST00000203979 636 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm9377-201ENSMUST00000207227 623 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm18598-201ENSMUST00000207724 597 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm23628-201ENSMUST00000082464 173 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm23444-201ENSMUST00000082922 191 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.05□□□□□ -2.08
Nkx3-1P97436 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Nkx3-1P97436 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm6429-201ENSMUST00000117144 475 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm14677-201ENSMUST00000117866 486 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm15106-201ENSMUST00000119691 821 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm13433-201ENSMUST00000121701 240 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm22392-201ENSMUST00000177971 107 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm26622-201ENSMUST00000180520 298 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Mir497-201ENSMUST00000200557 84 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.04□□□□□ -2.08
Nkx3-1P97436 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.04□□□□□ -2.08
Nkx3-1P97436 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm14008-201ENSMUST00000120483 274 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm12383-201ENSMUST00000120628 760 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm5958-201ENSMUST00000147698 297 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm23587-201ENSMUST00000157658 84 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm24546-201ENSMUST00000158652 102 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm19498-201ENSMUST00000191128 331 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm43070-201ENSMUST00000196938 415 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Mir3069-201ENSMUST00000198802 65 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm18617-201ENSMUST00000222311 259 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm23249-201ENSMUST00000083369 161 ntBASIC2.03□□□□□ -2.08
Nkx3-1P97436 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Nkx3-1P97436 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm25313-201ENSMUST00000101817 116 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Mir706-201ENSMUST00000102262 84 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm12871-201ENSMUST00000118758 438 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm16458-201ENSMUST00000121428 502 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm22339-201ENSMUST00000157718 62 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm24960-201ENSMUST00000157923 90 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm17655-201ENSMUST00000167969 255 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm22776-201ENSMUST00000178634 94 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm23767-201ENSMUST00000179278 94 ntBASIC2.02□□□□□ -2.09
Nkx3-1P97436 Gm23287-201ENSMUST00000179427 116 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms