Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm5471-201ENSMUST00000072732 337 ntBASIC2.55□□□□□ -2
Cldn18P56857 Gm24622-201ENSMUST00000082619 162 ntBASIC2.55□□□□□ -2
Cldn18P56857 Gm23448-201ENSMUST00000083151 104 ntBASIC2.55□□□□□ -2
Cldn18P56857 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cldn18P56857 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.55□□□□□ -2
Cldn18P56857 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Cldn18P56857 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cldn18P56857 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn18P56857 Gm14448-201ENSMUST00000116383 210 ntBASIC2.54□□□□□ -2
Cldn18P56857 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm13443-201ENSMUST00000120770 555 ntBASIC2.54□□□□□ -2
Cldn18P56857 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.54□□□□□ -2
Cldn18P56857 Gm14804-201ENSMUST00000122322 508 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm22141-201ENSMUST00000157403 277 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.54□□□□□ -2
Cldn18P56857 Gm17186-201ENSMUST00000171742 456 ntBASIC2.54□□□□□ -2
Cldn18P56857 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm23145-201ENSMUST00000178912 79 ntBASIC2.54□□□□□ -2
Cldn18P56857 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm18551-201ENSMUST00000195594 642 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 Gm43224-201ENSMUST00000201567 898 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm44223-201ENSMUST00000204854 114 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm44520-201ENSMUST00000205447 802 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm45023-201ENSMUST00000207951 379 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm6012-201ENSMUST00000210821 730 ntBASIC2.54□□□□□ -2
Cldn18P56857 Gm45439-201ENSMUST00000211723 359 ntBASIC2.54□□□□□ -2
Cldn18P56857 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.54□□□□□ -2
Cldn18P56857 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.54□□□□□ -2
Cldn18P56857 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.54□□□□□ -2
Cldn18P56857 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.54□□□□□ -2
Cldn18P56857 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.54□□□□□ -2
Cldn18P56857 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Cldn18P56857 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn18P56857 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.54□□□□□ -2
Cldn18P56857 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn18P56857 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn18P56857 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn18P56857 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn18P56857 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn18P56857 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm25539-201ENSMUST00000116886 122 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm14669-201ENSMUST00000118841 250 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm11943-201ENSMUST00000119473 327 ntBASIC2.53□□□□□ -2
Cldn18P56857 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm5646-201ENSMUST00000120568 714 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm2768-201ENSMUST00000121062 250 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm11389-201ENSMUST00000121407 430 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm11819-201ENSMUST00000122192 372 ntBASIC2.53□□□□□ -2
Cldn18P56857 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.53□□□□□ -2
Cldn18P56857 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn18P56857 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.53□□□□□ -2
Cldn18P56857 Gm24443-201ENSMUST00000157242 132 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm22839-201ENSMUST00000158436 304 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm17377-201ENSMUST00000165184 207 ntBASIC2.53□□□□□ -2
Cldn18P56857 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.53□□□□□ -2
Cldn18P56857 Gm37987-201ENSMUST00000194999 825 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.53□□□□□ -2
Cldn18P56857 Gm45071-201ENSMUST00000205353 571 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm44720-201ENSMUST00000206076 260 ntBASIC2.53□□□□□ -2
Cldn18P56857 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.53□□□□□ -2
Cldn18P56857 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm4921-201ENSMUST00000219804 992 ntBASIC2.53□□□□□ -2
Cldn18P56857 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cldn18P56857 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.53□□□□□ -2
Cldn18P56857 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.53□□□□□ -2
Cldn18P56857 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.53□□□□□ -2
Cldn18P56857 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.53□□□□□ -2
Cldn18P56857 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm25202-201ENSMUST00000082838 191 ntBASIC2.53□□□□□ -2
Cldn18P56857 Gm24446-201ENSMUST00000083982 156 ntBASIC2.53□□□□□ -2
Cldn18P56857 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.53□□□□□ -2
Cldn18P56857 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cldn18P56857 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.53□□□□□ -2.01
Cldn18P56857 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn18P56857 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Cldn18P56857 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn18P56857 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn18P56857 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.52□□□□□ -2.01
Cldn18P56857 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn18P56857 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cldn18P56857 Gm13349-201ENSMUST00000118436 411 ntBASIC2.52□□□□□ -2.01
Cldn18P56857 Gm12935-201ENSMUST00000119352 246 ntBASIC2.52□□□□□ -2.01
Cldn18P56857 Gm14159-201ENSMUST00000119832 451 ntBASIC2.52□□□□□ -2.01
Cldn18P56857 DQ267100-201ENSMUST00000122600 72 ntBASIC2.52□□□□□ -2.01
Cldn18P56857 Gm25334-201ENSMUST00000158036 110 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms