Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm11606-201ENSMUST00000120706 617 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm14578-201ENSMUST00000122166 391 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm14530-201ENSMUST00000122391 333 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm5963-201ENSMUST00000143451 236 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm24534-201ENSMUST00000157949 291 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm20399-201ENSMUST00000174652 132 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Mir5112-201ENSMUST00000174897 60 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm26219-201ENSMUST00000175216 71 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm25451-201ENSMUST00000177832 121 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm24897-201ENSMUST00000179033 107 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm24306-201ENSMUST00000180229 79 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm28141-201ENSMUST00000186676 342 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm38041-201ENSMUST00000194445 661 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm37791-201ENSMUST00000195081 286 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm42832-201ENSMUST00000196361 745 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm43239-201ENSMUST00000200131 201 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm43415-201ENSMUST00000201934 750 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm44726-201ENSMUST00000203427 217 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm45173-201ENSMUST00000206819 305 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm44754-201ENSMUST00000208155 400 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm45344-201ENSMUST00000211610 341 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm35405-201ENSMUST00000218754 400 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm9762-201ENSMUST00000036976 444 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Mir19a-201ENSMUST00000083482 82 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm10212-201ENSMUST00000087884 324 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm13167-201ENSMUST00000118554 578 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm14307-201ENSMUST00000118930 291 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm11798-201ENSMUST00000119150 421 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm13406-201ENSMUST00000121991 256 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm14297-201ENSMUST00000129110 291 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm23098-201ENSMUST00000157552 299 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm3111-201ENSMUST00000167426 490 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Mir5129-201ENSMUST00000174938 78 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Mir5101-201ENSMUST00000175181 83 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm22120-201ENSMUST00000175590 70 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm23619-201ENSMUST00000178411 94 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm25474-201ENSMUST00000179052 94 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm22047-201ENSMUST00000179176 94 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm27236-201ENSMUST00000184147 442 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm28030-201ENSMUST00000184987 138 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm28343-201ENSMUST00000185386 112 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm7329-201ENSMUST00000185915 210 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm28779-201ENSMUST00000189678 323 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm42665-201ENSMUST00000202100 586 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm10042-201ENSMUST00000079884 78 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Nkx2-1P50220 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.85□□□□□ -1.95
Nkx2-1P50220 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.84□□□□□ -1.95
Nkx2-1P50220 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx2-1P50220 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.84□□□□□ -1.95
Nkx2-1P50220 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx2-1P50220 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.84□□□□□ -1.95
Nkx2-1P50220 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx2-1P50220 Gm22758-201ENSMUST00000102275 96 ntBASIC2.84□□□□□ -1.95
Nkx2-1P50220 Gm25876-201ENSMUST00000104329 119 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms