Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm18341-201ENSMUST00000197538 622 ntBASIC1.71□□□□□ -2.14
HttP42859 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.71□□□□□ -2.14
HttP42859 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HttP42859 Gm25728-201ENSMUST00000104525 159 ntBASIC1.71□□□□□ -2.14
HttP42859 Mir7079-201ENSMUST00000184697 69 ntBASIC1.71□□□□□ -2.14
HttP42859 Gm19193-201ENSMUST00000190263 590 ntBASIC1.71□□□□□ -2.14
HttP42859 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.71□□□□□ -2.14
HttP42859 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HttP42859 Gm12765-201ENSMUST00000117273 615 ntBASIC1.71□□□□□ -2.14
HttP42859 Gm12313-201ENSMUST00000121347 421 ntBASIC1.71□□□□□ -2.14
HttP42859 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HttP42859 Gm42539-201ENSMUST00000197009 308 ntBASIC1.71□□□□□ -2.14
HttP42859 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HttP42859 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.71□□□□□ -2.14
HttP42859 Gm14065-201ENSMUST00000120848 585 ntBASIC1.7□□□□□ -2.14
HttP42859 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC1.7□□□□□ -2.14
HttP42859 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.7□□□□□ -2.14
HttP42859 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.7□□□□□ -2.14
HttP42859 Gm10794-201ENSMUST00000099624 207 ntBASIC1.7□□□□□ -2.14
HttP42859 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HttP42859 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.7□□□□□ -2.14
HttP42859 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HttP42859 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.7□□□□□ -2.14
HttP42859 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HttP42859 Gm25958-201ENSMUST00000175114 71 ntBASIC1.7□□□□□ -2.14
HttP42859 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
HttP42859 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.7□□□□□ -2.14
HttP42859 Gm45173-201ENSMUST00000206819 305 ntBASIC1.7□□□□□ -2.14
HttP42859 CT572983.1-201ENSMUST00000226895 514 ntBASIC1.7□□□□□ -2.14
HttP42859 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HttP42859 Gm25715-201ENSMUST00000158627 125 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm17062-201ENSMUST00000166987 461 ntBASIC1.69□□□□□ -2.14
HttP42859 Mir466m-201ENSMUST00000175052 84 ntBASIC1.69□□□□□ -2.14
HttP42859 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HttP42859 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm22416-201ENSMUST00000158590 88 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm25119-201ENSMUST00000158815 88 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm45049-201ENSMUST00000207586 591 ntBASIC1.69□□□□□ -2.14
HttP42859 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.69□□□□□ -2.14
HttP42859 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HttP42859 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
HttP42859 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.69□□□□□ -2.14
HttP42859 Gm27493-201ENSMUST00000184128 78 ntBASIC1.69□□□□□ -2.14
HttP42859 Mir7063-201ENSMUST00000184158 91 ntBASIC1.69□□□□□ -2.14
HttP42859 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.69□□□□□ -2.14
HttP42859 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.69□□□□□ -2.14
HttP42859 Gm25901-201ENSMUST00000158494 130 ntBASIC1.68□□□□□ -2.14
HttP42859 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm28500-201ENSMUST00000190286 151 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm18546-201ENSMUST00000197245 676 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm26126-201ENSMUST00000083188 164 ntBASIC1.68□□□□□ -2.14
HttP42859 Mir196b-201ENSMUST00000083509 85 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm22214-201ENSMUST00000157563 172 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm24656-201ENSMUST00000177548 132 ntBASIC1.68□□□□□ -2.14
HttP42859 Gm44277-201ENSMUST00000205128 649 ntBASIC1.68□□□□□ -2.14
HttP42859 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.68□□□□□ -2.14
HttP42859 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.68□□□□□ -2.14
HttP42859 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HttP42859 Gm25759-201ENSMUST00000103988 129 ntBASIC1.67□□□□□ -2.14
HttP42859 Gm25497-201ENSMUST00000104425 132 ntBASIC1.67□□□□□ -2.14
HttP42859 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HttP42859 Gm37778-201ENSMUST00000191732 190 ntBASIC1.67□□□□□ -2.14
HttP42859 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.67□□□□□ -2.14
HttP42859 Gm18188-201ENSMUST00000219386 478 ntBASIC1.67□□□□□ -2.14
HttP42859 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC1.67□□□□□ -2.14
HttP42859 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HttP42859 Gm23083-201ENSMUST00000157851 116 ntBASIC1.67□□□□□ -2.14
HttP42859 Gm24174-201ENSMUST00000158933 111 ntBASIC1.67□□□□□ -2.14
HttP42859 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC1.67□□□□□ -2.14
HttP42859 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.67□□□□□ -2.14
HttP42859 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.67□□□□□ -2.14
HttP42859 Gm20039-201ENSMUST00000210329 394 ntBASIC1.67□□□□□ -2.14
HttP42859 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.67□□□□□ -2.14
HttP42859 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.67□□□□□ -2.14
HttP42859 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.67□□□□□ -2.14
HttP42859 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HttP42859 Gm23008-201ENSMUST00000158946 80 ntBASIC1.66□□□□□ -2.14
HttP42859 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HttP42859 Gm10997-201ENSMUST00000210294 1500 ntBASIC1.66□□□□□ -2.14
HttP42859 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HttP42859 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HttP42859 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HttP42859 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HttP42859 Mir7232-201ENSMUST00000197929 74 ntBASIC1.66□□□□□ -2.14
HttP42859 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HttP42859 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HttP42859 Gm26178-201ENSMUST00000177706 107 ntBASIC1.66□□□□□ -2.14
HttP42859 Gm23151-201ENSMUST00000178061 107 ntBASIC1.66□□□□□ -2.14
HttP42859 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HttP42859 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.65□□□□□ -2.14
HttP42859 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.65□□□□□ -2.14
HttP42859 Gm24252-201ENSMUST00000083700 132 ntBASIC1.65□□□□□ -2.14
HttP42859 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.65□□□□□ -2.15
HttP42859 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HttP42859 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HttP42859 Gm14867-201ENSMUST00000120156 866 ntBASIC1.65□□□□□ -2.15
HttP42859 Gm27520-201ENSMUST00000184872 81 ntBASIC1.65□□□□□ -2.15
HttP42859 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.65□□□□□ -2.15
HttP42859 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms