Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm9850-201ENSMUST00000117916 227 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm13349-201ENSMUST00000118436 411 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm22561-201ENSMUST00000157331 84 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm17187-201ENSMUST00000164622 410 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm3111-201ENSMUST00000167426 490 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm24520-201ENSMUST00000179510 110 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm23648-201ENSMUST00000180301 107 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm29365-201ENSMUST00000189461 699 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm28648-201ENSMUST00000190092 343 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm19253-201ENSMUST00000204279 307 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm17991-201ENSMUST00000208139 297 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm19563-201ENSMUST00000222031 270 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
Foxa1P35582 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm10038-201ENSMUST00000077233 441 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm23506-201ENSMUST00000083077 107 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Foxa1P35582 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Foxa1P35582 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.62□□□□□ -1.99
Foxa1P35582 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm14359-201ENSMUST00000118883 424 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm14566-201ENSMUST00000118915 321 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm14815-201ENSMUST00000120060 488 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm14360-201ENSMUST00000120670 393 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm25807-201ENSMUST00000122783 305 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm9498-201ENSMUST00000140849 291 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm26173-201ENSMUST00000158416 136 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm20415-201ENSMUST00000172877 423 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Snord93-201ENSMUST00000175580 71 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm24925-201ENSMUST00000178157 107 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm26177-201ENSMUST00000178683 107 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm27249-201ENSMUST00000185049 328 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.61□□□□□ -1.99
Foxa1P35582 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm42805-201ENSMUST00000196158 276 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm44181-201ENSMUST00000203106 483 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm44425-201ENSMUST00000203739 429 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.61□□□□□ -1.99
Foxa1P35582 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.61□□□□□ -1.99
Foxa1P35582 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Foxa1P35582 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Foxa1P35582 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Foxa1P35582 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Foxa1P35582 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Foxa1P35582 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Foxa1P35582 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Foxa1P35582 Gm14008-201ENSMUST00000120483 274 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm13443-201ENSMUST00000120770 555 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.6□□□□□ -1.99
Foxa1P35582 Gm24443-201ENSMUST00000157242 132 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm26401-201ENSMUST00000158502 76 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm23312-201ENSMUST00000158774 102 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Foxa1P35582 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm22584-201ENSMUST00000177935 92 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm28474-201ENSMUST00000188501 315 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm43489-201ENSMUST00000196810 993 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm43171-201ENSMUST00000199882 291 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm44125-201ENSMUST00000203068 448 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.6□□□□□ -1.99
Foxa1P35582 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Foxa1P35582 Gm44208-201ENSMUST00000205199 421 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm45105-201ENSMUST00000207824 397 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm45316-201ENSMUST00000210128 162 ntBASIC2.6□□□□□ -1.99
Foxa1P35582 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.6□□□□□ -1.99
Foxa1P35582 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms