Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd9P28357 Gm25203-201ENSMUST00000082842 215 ntBASIC4.62□□□□□ -1.67
Hoxd9P28357 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.62□□□□□ -1.67
Hoxd9P28357 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.62□□□□□ -1.67
Hoxd9P28357 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.62□□□□□ -1.67
Hoxd9P28357 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Hoxd9P28357 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd9P28357 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd9P28357 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd9P28357 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Hoxd9P28357 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.62□□□□□ -1.67
Hoxd9P28357 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd9P28357 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd9P28357 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm650-201ENSMUST00000144428 1551 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Mir667-201ENSMUST00000102441 92 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm8145-201ENSMUST00000118220 745 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm11196-201ENSMUST00000119052 395 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.61□□□□□ -1.67
Hoxd9P28357 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm26404-201ENSMUST00000158498 109 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm24664-201ENSMUST00000158939 100 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm22450-201ENSMUST00000179641 107 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm27608-201ENSMUST00000184822 162 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm44391-201ENSMUST00000198490 93 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm44261-201ENSMUST00000203337 209 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm34224-201ENSMUST00000204606 364 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm44960-201ENSMUST00000207403 141 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm2607-201ENSMUST00000212389 627 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm25814-201ENSMUST00000082754 107 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm26071-201ENSMUST00000083261 107 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm23455-201ENSMUST00000083331 100 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm24521-201ENSMUST00000083958 107 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.61□□□□□ -1.67
Hoxd9P28357 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd9P28357 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm26147-201ENSMUST00000104479 114 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm12112-201ENSMUST00000117772 231 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm13581-201ENSMUST00000120675 278 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm14770-201ENSMUST00000122197 312 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm22343-201ENSMUST00000122648 286 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm26490-201ENSMUST00000157879 140 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm23513-201ENSMUST00000158181 133 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm20674-201ENSMUST00000177452 369 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm23355-201ENSMUST00000177614 107 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm25615-201ENSMUST00000177836 94 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm23148-201ENSMUST00000180367 107 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Mir7056-201ENSMUST00000183776 59 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm28344-201ENSMUST00000185704 279 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm37693-201ENSMUST00000194562 234 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm36954-201ENSMUST00000195362 363 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm18011-201ENSMUST00000203717 565 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm18540-201ENSMUST00000204025 526 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm45513-201ENSMUST00000210228 376 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.6□□□□□ -1.67
Hoxd9P28357 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.6□□□□□ -1.67
Hoxd9P28357 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm7093-201ENSMUST00000223004 581 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm10351-201ENSMUST00000087694 125 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Mir504-201ENSMUST00000093602 79 ntBASIC4.6□□□□□ -1.67
Hoxd9P28357 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hoxd9P28357 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Hoxd9P28357 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms