Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm11229-201ENSMUST00000121993 437 ntBASIC2.55□□□□□ -2
P20040 Gm12368-201ENSMUST00000122251 434 ntBASIC2.55□□□□□ -2
P20040 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.55□□□□□ -2
P20040 Gm22755-201ENSMUST00000157143 100 ntBASIC2.55□□□□□ -2
P20040 Gm26101-201ENSMUST00000157246 105 ntBASIC2.55□□□□□ -2
P20040 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.55□□□□□ -2
P20040 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P20040 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.55□□□□□ -2
P20040 Gm18520-201ENSMUST00000174783 658 ntBASIC2.55□□□□□ -2
P20040 Mir6405-201ENSMUST00000184584 124 ntBASIC2.55□□□□□ -2
P20040 Gm27249-201ENSMUST00000185049 328 ntBASIC2.55□□□□□ -2
P20040 Gm19224-201ENSMUST00000190477 793 ntBASIC2.55□□□□□ -2
P20040 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.55□□□□□ -2
P20040 Gm19649-201ENSMUST00000201126 822 ntBASIC2.55□□□□□ -2
P20040 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P20040 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P20040 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P20040 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P20040 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P20040 Gm46193-201ENSMUST00000219399 364 ntBASIC2.55□□□□□ -2
P20040 Gm17872-201ENSMUST00000222550 532 ntBASIC2.55□□□□□ -2
P20040 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.55□□□□□ -2
P20040 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.55□□□□□ -2
P20040 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.55□□□□□ -2
P20040 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
P20040 Mir184-201ENSMUST00000083662 69 ntBASIC2.55□□□□□ -2
P20040 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
P20040 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
P20040 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
P20040 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.54□□□□□ -2
P20040 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
P20040 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
P20040 Gm12656-201ENSMUST00000118149 577 ntBASIC2.54□□□□□ -2
P20040 Gm14794-201ENSMUST00000118181 192 ntBASIC2.54□□□□□ -2
P20040 Gm9119-201ENSMUST00000118866 495 ntBASIC2.54□□□□□ -2
P20040 Gm2318-201ENSMUST00000119623 639 ntBASIC2.54□□□□□ -2
P20040 Gm9043-201ENSMUST00000119677 314 ntBASIC2.54□□□□□ -2
P20040 Gm5937-201ENSMUST00000119715 643 ntBASIC2.54□□□□□ -2
P20040 Gm15719-201ENSMUST00000120619 635 ntBASIC2.54□□□□□ -2
P20040 Gm2768-201ENSMUST00000121062 250 ntBASIC2.54□□□□□ -2
P20040 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.54□□□□□ -2
P20040 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.54□□□□□ -2
P20040 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.54□□□□□ -2
P20040 Gm22839-201ENSMUST00000158436 304 ntBASIC2.54□□□□□ -2
P20040 Gm23380-201ENSMUST00000158448 103 ntBASIC2.54□□□□□ -2
P20040 Gm23409-201ENSMUST00000158516 237 ntBASIC2.54□□□□□ -2
P20040 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.54□□□□□ -2
P20040 Gm7438-201ENSMUST00000177664 639 ntBASIC2.54□□□□□ -2
P20040 Gm7408-201ENSMUST00000178014 639 ntBASIC2.54□□□□□ -2
P20040 Gm7386-201ENSMUST00000178020 639 ntBASIC2.54□□□□□ -2
P20040 Gm25874-201ENSMUST00000178030 79 ntBASIC2.54□□□□□ -2
P20040 Gm24925-201ENSMUST00000178157 107 ntBASIC2.54□□□□□ -2
P20040 Gm3657-201ENSMUST00000178170 639 ntBASIC2.54□□□□□ -2
P20040 Gm7415-201ENSMUST00000178205 639 ntBASIC2.54□□□□□ -2
P20040 Gm7398-201ENSMUST00000178589 639 ntBASIC2.54□□□□□ -2
P20040 Gm7391-201ENSMUST00000178680 639 ntBASIC2.54□□□□□ -2
P20040 Gm7375-201ENSMUST00000179232 639 ntBASIC2.54□□□□□ -2
P20040 Gm23860-201ENSMUST00000179446 132 ntBASIC2.54□□□□□ -2
P20040 Gm3681-201ENSMUST00000179940 639 ntBASIC2.54□□□□□ -2
P20040 Gm23648-201ENSMUST00000180301 107 ntBASIC2.54□□□□□ -2
P20040 Gm25873-201ENSMUST00000180317 107 ntBASIC2.54□□□□□ -2
P20040 Gm8676-201ENSMUST00000184206 637 ntBASIC2.54□□□□□ -2
P20040 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.54□□□□□ -2
P20040 Gm9973-202ENSMUST00000220926 166 ntBASIC2.54□□□□□ -2
P20040 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.54□□□□□ -2
P20040 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.54□□□□□ -2
P20040 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.54□□□□□ -2
P20040 Gm22265-201ENSMUST00000082947 116 ntBASIC2.54□□□□□ -2
P20040 Gm23506-201ENSMUST00000083077 107 ntBASIC2.54□□□□□ -2
P20040 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
P20040 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
P20040 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
P20040 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
P20040 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P20040 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.53□□□□□ -2
P20040 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
P20040 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P20040 Gm22658-201ENSMUST00000104196 155 ntBASIC2.53□□□□□ -2
P20040 Mir466n-201ENSMUST00000104798 94 ntBASIC2.53□□□□□ -2
P20040 Gm5646-201ENSMUST00000120568 714 ntBASIC2.53□□□□□ -2
P20040 Gm14069-201ENSMUST00000120815 229 ntBASIC2.53□□□□□ -2
P20040 Gm11414-201ENSMUST00000121795 263 ntBASIC2.53□□□□□ -2
P20040 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.53□□□□□ -2
P20040 Gm24532-201ENSMUST00000157951 286 ntBASIC2.53□□□□□ -2
P20040 Gm23895-201ENSMUST00000158108 160 ntBASIC2.53□□□□□ -2
P20040 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.53□□□□□ -2
P20040 Gm8338-201ENSMUST00000163928 363 ntBASIC2.53□□□□□ -2
P20040 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.53□□□□□ -2
P20040 Gm27330-201ENSMUST00000184689 132 ntBASIC2.53□□□□□ -2
P20040 Gm17929-201ENSMUST00000186851 627 ntBASIC2.53□□□□□ -2
P20040 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.53□□□□□ -2
P20040 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.53□□□□□ -2
P20040 Olfr815-201ENSMUST00000071557 951 ntBASIC2.53□□□□□ -2
P20040 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
P20040 Gm24610-201ENSMUST00000083270 109 ntBASIC2.53□□□□□ -2
P20040 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.53□□□□□ -2
P20040 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P20040 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P20040 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P20040 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms