Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28755-201ENSMUST00000185773 199 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm37097-201ENSMUST00000193676 336 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.31□□□□□ -2.04
Sdc1P18828 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.31□□□□□ -2.04
Sdc1P18828 Mir5121-201ENSMUST00000198528 74 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm25203-202ENSMUST00000200458 216 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm44688-201ENSMUST00000209083 537 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm17911-201ENSMUST00000210806 877 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.31□□□□□ -2.04
Sdc1P18828 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.31□□□□□ -2.04
Sdc1P18828 AC140344.1-201ENSMUST00000223384 387 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm9174-201ENSMUST00000078149 255 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm25203-201ENSMUST00000082842 215 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc1P18828 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc1P18828 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm23530-201ENSMUST00000104564 137 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm11813-201ENSMUST00000118586 291 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm15060-201ENSMUST00000119550 948 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm15112-201ENSMUST00000120152 860 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm11829-201ENSMUST00000121003 282 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm23559-201ENSMUST00000157824 103 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm24100-201ENSMUST00000178592 79 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm26177-201ENSMUST00000178683 107 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm23648-201ENSMUST00000180301 107 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm5224-201ENSMUST00000183060 350 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Mir6899-201ENSMUST00000184798 64 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Mir6933-201ENSMUST00000184982 81 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm17929-201ENSMUST00000186851 627 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm28412-201ENSMUST00000187243 177 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm8498-201ENSMUST00000188227 974 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm29704-201ENSMUST00000196011 253 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Mir703-201ENSMUST00000197105 109 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm5983-201ENSMUST00000197739 770 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm8041-201ENSMUST00000199755 616 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm43901-201ENSMUST00000203247 453 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm44295-201ENSMUST00000203805 437 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm34701-202ENSMUST00000204685 360 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm44478-201ENSMUST00000204875 114 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm7948-201ENSMUST00000212607 844 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm18488-201ENSMUST00000215082 364 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Sdc1P18828 Gm23506-201ENSMUST00000083077 107 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Mir132-201ENSMUST00000083603 66 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Mir465-201ENSMUST00000093563 74 ntBASIC2.3□□□□□ -2.04
Sdc1P18828 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Sdc1P18828 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc1P18828 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.29□□□□□ -2.04
Sdc1P18828 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm24126-201ENSMUST00000104111 106 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm14657-201ENSMUST00000117461 302 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm13482-201ENSMUST00000119842 254 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm2768-201ENSMUST00000121062 250 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm24836-201ENSMUST00000122609 108 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc1P18828 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm24436-201ENSMUST00000157889 302 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm23034-201ENSMUST00000158001 147 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc1P18828 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm23190-201ENSMUST00000180307 64 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm29263-201ENSMUST00000188718 463 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm28384-201ENSMUST00000189079 463 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Mir129b-201ENSMUST00000197461 65 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm35570-201ENSMUST00000198730 681 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm43600-201ENSMUST00000202134 223 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm44125-201ENSMUST00000203068 448 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm19252-201ENSMUST00000204705 305 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms