Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Cdx1P18111 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm12042-201ENSMUST00000120479 301 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm13406-201ENSMUST00000121991 256 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm26275-201ENSMUST00000157101 268 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm24475-201ENSMUST00000157435 143 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm23754-201ENSMUST00000157576 63 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm18397-201ENSMUST00000176704 587 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm27942-201ENSMUST00000184669 101 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm29045-201ENSMUST00000187278 698 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm28785-201ENSMUST00000187478 379 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm29460-201ENSMUST00000188607 714 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm29288-201ENSMUST00000191582 901 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm6510-201ENSMUST00000195916 574 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm43232-201ENSMUST00000201346 364 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm45173-201ENSMUST00000206819 305 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm44964-201ENSMUST00000207011 273 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm44594-201ENSMUST00000208982 407 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm6030-201ENSMUST00000078768 402 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm26129-201ENSMUST00000082719 107 ntBASIC2.4□□□□□ -2.03
Cdx1P18111 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Cdx1P18111 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cdx1P18111 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Cdx1P18111 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cdx1P18111 Gm26423-201ENSMUST00000104277 128 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm14073-201ENSMUST00000117344 381 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm22339-201ENSMUST00000157718 62 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm17065-201ENSMUST00000165245 239 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm20672-201ENSMUST00000176605 261 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm22131-201ENSMUST00000178415 94 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Mir7014-201ENSMUST00000183853 63 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Mir8096-201ENSMUST00000184526 127 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx1P18111 Gm1833-201ENSMUST00000191608 682 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm43979-201ENSMUST00000203179 475 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm44058-201ENSMUST00000204335 467 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdx1P18111 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdx1P18111 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdx1P18111 Gm22154-201ENSMUST00000083844 131 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx1P18111 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx1P18111 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.39□□□□□ -2.03
Cdx1P18111 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdx1P18111 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm16053-201ENSMUST00000120511 188 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm26348-201ENSMUST00000157528 240 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm25981-201ENSMUST00000157921 295 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm23409-201ENSMUST00000158516 237 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm26195-201ENSMUST00000175035 101 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm19257-201ENSMUST00000186121 183 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm17946-201ENSMUST00000186856 538 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm20948-201ENSMUST00000211091 449 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm45344-201ENSMUST00000211610 341 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm21089-201ENSMUST00000215843 325 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdx1P18111 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdx1P18111 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdx1P18111 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm23104-201ENSMUST00000083722 104 ntBASIC2.38□□□□□ -2.03
Cdx1P18111 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx1P18111 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
Cdx1P18111 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx1P18111 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx1P18111 Gm25213-201ENSMUST00000102388 113 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx1P18111 Gm11576-201ENSMUST00000117433 417 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms