Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Msx1P13297 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.97□□□□□ -1.61
Msx1P13297 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
Msx1P13297 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Msx1P13297 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Msx1P13297 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Msx1P13297 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Msx1P13297 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Msx1P13297 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Msx1P13297 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Msx1P13297 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 Gm24469-201ENSMUST00000104487 131 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm12902-201ENSMUST00000118389 322 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm13273-201ENSMUST00000119737 159 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm14782-201ENSMUST00000120151 195 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm14845-201ENSMUST00000121259 306 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 Gm23956-201ENSMUST00000157211 119 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm25494-201ENSMUST00000158143 100 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Scarna13-201ENSMUST00000158164 275 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm25605-201ENSMUST00000158364 124 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm22699-201ENSMUST00000175376 105 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm27551-201ENSMUST00000184258 77 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm43524-201ENSMUST00000197278 298 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Mir409-201ENSMUST00000198153 79 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm4714-201ENSMUST00000203395 279 ntBASIC4.96□□□□□ -1.62
Msx1P13297 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm26121-201ENSMUST00000083364 162 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Msx1P13297 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Msx1P13297 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.96□□□□□ -1.62
Msx1P13297 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.96□□□□□ -1.62
Msx1P13297 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Msx1P13297 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Msx1P13297 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Msx1P13297 Gm11456-201ENSMUST00000121070 256 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Gm11645-201ENSMUST00000121589 649 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.95□□□□□ -1.62
Msx1P13297 Gm22870-201ENSMUST00000157501 112 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 Gm24308-201ENSMUST00000177773 114 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Msx1P13297 Gm27761-201ENSMUST00000184091 131 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Mir6975-201ENSMUST00000184879 61 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Gm10048-201ENSMUST00000194196 372 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Gm35702-201ENSMUST00000198653 511 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.95□□□□□ -1.62
Msx1P13297 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Msx1P13297 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Msx1P13297 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.95□□□□□ -1.62
Msx1P13297 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.95□□□□□ -1.62
Msx1P13297 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.95□□□□□ -1.62
Msx1P13297 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Msx1P13297 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Msx1P13297 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.94□□□□□ -1.62
Msx1P13297 Gm24477-201ENSMUST00000157438 103 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Gm29574-201ENSMUST00000186226 696 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Gm42542-201ENSMUST00000197978 268 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Gm45420-201ENSMUST00000211243 425 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Gm17999-201ENSMUST00000211568 542 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.94□□□□□ -1.62
Msx1P13297 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.94□□□□□ -1.62
Msx1P13297 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Msx1P13297 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Msx1P13297 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Msx1P13297 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Msx1P13297 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.94□□□□□ -1.62
Msx1P13297 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Msx1P13297 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Msx1P13297 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Msx1P13297 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Msx1P13297 Gm21940-201ENSMUST00000204940 2278 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms