Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm44563-201ENSMUST00000207958 178 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm45420-201ENSMUST00000211243 425 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hoxd3P09027 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm25187-201ENSMUST00000083906 133 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm7676-201ENSMUST00000084055 319 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm10360-201ENSMUST00000097219 272 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm12884-201ENSMUST00000120371 325 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm5396-201ENSMUST00000121222 532 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm26318-201ENSMUST00000176507 96 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Mir6400-201ENSMUST00000184870 92 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm38270-201ENSMUST00000192721 407 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm37445-201ENSMUST00000195318 242 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm45553-201ENSMUST00000209929 507 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm45660-201ENSMUST00000210267 151 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm40692-201ENSMUST00000220411 491 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Hoxd3P09027 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.11□□□□□ -1.75
Hoxd3P09027 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hoxd3P09027 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm22266-201ENSMUST00000104011 138 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm14732-201ENSMUST00000121372 545 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm25176-201ENSMUST00000122640 125 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm23781-201ENSMUST00000157940 308 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm22160-201ENSMUST00000158405 328 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm7182-201ENSMUST00000193351 732 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm8820-201ENSMUST00000204077 571 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm44184-201ENSMUST00000204290 132 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm45539-201ENSMUST00000210313 428 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm7422-201ENSMUST00000220115 640 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm25651-201ENSMUST00000083782 119 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm23042-201ENSMUST00000083866 101 ntBASIC4.1□□□□□ -1.75
Hoxd3P09027 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd3P09027 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hoxd3P09027 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms