Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm12230-201ENSMUST00000118301 454 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm23599-201ENSMUST00000157261 251 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm7094-201ENSMUST00000178379 366 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm23287-201ENSMUST00000179427 116 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm23143-201ENSMUST00000180137 116 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm27636-201ENSMUST00000184528 122 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm27942-201ENSMUST00000184669 101 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm28191-201ENSMUST00000189112 211 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm43083-201ENSMUST00000199594 476 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col5a1O88207 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm6369-201ENSMUST00000069626 412 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm24871-201ENSMUST00000083099 116 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm24889-201ENSMUST00000104388 132 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm14469-201ENSMUST00000118363 202 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm14795-201ENSMUST00000118461 471 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm25488-201ENSMUST00000158728 118 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm27715-201ENSMUST00000184714 260 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm38333-201ENSMUST00000193608 604 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Mir142-201ENSMUST00000198092 64 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm18338-201ENSMUST00000222381 560 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Olfr815-201ENSMUST00000071557 951 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col5a1O88207 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm24144-201ENSMUST00000082632 111 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col5a1O88207 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col5a1O88207 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.09□□□□□ -2.07
Col5a1O88207 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
Col5a1O88207 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Col5a1O88207 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.09□□□□□ -2.07
Col5a1O88207 Gm14794-201ENSMUST00000118181 192 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm24858-201ENSMUST00000158058 323 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm25898-201ENSMUST00000158303 106 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm24757-201ENSMUST00000176987 371 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm42818-201ENSMUST00000198869 987 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm9973-202ENSMUST00000220926 166 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm23975-201ENSMUST00000082685 106 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm23846-201ENSMUST00000083835 107 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm21286-201ENSMUST00000098035 545 ntBASIC2.09□□□□□ -2.08
Col5a1O88207 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col5a1O88207 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.09□□□□□ -2.08
Col5a1O88207 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.08□□□□□ -2.08
Col5a1O88207 Gm22713-201ENSMUST00000116895 130 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm12889-201ENSMUST00000118684 241 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm16373-201ENSMUST00000129517 303 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm22793-201ENSMUST00000157227 330 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm24010-201ENSMUST00000157731 282 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm22646-201ENSMUST00000175130 115 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm24811-201ENSMUST00000175313 100 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm27527-201ENSMUST00000183903 99 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm37213-201ENSMUST00000193077 586 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Mir3069-201ENSMUST00000198802 65 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm43004-201ENSMUST00000201872 703 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.08□□□□□ -2.08
Col5a1O88207 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.08□□□□□ -2.08
Col5a1O88207 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col5a1O88207 Mir465-201ENSMUST00000093563 74 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col5a1O88207 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.08□□□□□ -2.08
Col5a1O88207 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col5a1O88207 Gm12881-201ENSMUST00000121191 203 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms