Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm12876-201ENSMUST00000120975 408 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm25555-201ENSMUST00000158078 111 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm44425-201ENSMUST00000203739 429 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm7751-201ENSMUST00000212868 709 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm19335-201ENSMUST00000195836 2069 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm6829-201ENSMUST00000119858 360 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm23441-201ENSMUST00000157268 127 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.74□□□□□ -2.13
Cacna1bO55017 Mir1954-201ENSMUST00000175595 86 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm24863-201ENSMUST00000179499 107 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm43494-201ENSMUST00000197672 388 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm45689-201ENSMUST00000210522 133 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm24445-201ENSMUST00000083981 107 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cacna1bO55017 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.74□□□□□ -2.13
Cacna1bO55017 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Mir6240-201ENSMUST00000184281 117 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm45367-201ENSMUST00000210171 347 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Cacna1bO55017 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm6462-201ENSMUST00000081488 304 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm22345-201ENSMUST00000122644 107 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm23340-201ENSMUST00000158955 123 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm16569-201ENSMUST00000160526 314 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm7407-201ENSMUST00000208301 568 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Gm24044-201ENSMUST00000083107 156 ntBASIC1.73□□□□□ -2.13
Cacna1bO55017 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cacna1bO55017 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm25787-201ENSMUST00000104709 92 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm11483-201ENSMUST00000119839 247 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm25883-201ENSMUST00000157781 271 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm26001-201ENSMUST00000157989 103 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm37054-201ENSMUST00000193481 543 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Mir7021-201ENSMUST00000197026 63 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm18660-201ENSMUST00000199542 629 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 AC099612.2-201ENSMUST00000226824 721 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cacna1bO55017 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm7846-201ENSMUST00000145844 274 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm26029-201ENSMUST00000158659 132 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm22929-201ENSMUST00000175517 107 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm43090-201ENSMUST00000202459 314 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm44881-201ENSMUST00000205425 367 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm6112-201ENSMUST00000208037 629 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Gm8679-201ENSMUST00000210651 1036 ntBASIC1.72□□□□□ -2.13
Cacna1bO55017 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cacna1bO55017 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cacna1bO55017 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm11433-201ENSMUST00000118318 228 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm13409-201ENSMUST00000122072 546 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm22226-201ENSMUST00000157355 109 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm17186-201ENSMUST00000171742 456 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm24656-201ENSMUST00000177548 132 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Mir7665-201ENSMUST00000184907 63 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm42506-201ENSMUST00000202009 150 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.71□□□□□ -2.14
Cacna1bO55017 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm25051-201ENSMUST00000158602 249 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC1.71□□□□□ -2.14
Cacna1bO55017 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Gm29884-201ENSMUST00000218403 453 ntBASIC1.71□□□□□ -2.14
Cacna1bO55017 Mir148b-201ENSMUST00000083626 97 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms