Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Gm10343-201ENSMUST00000096279 348 ntBASIC4.38□□□□□ -1.71
Trim55G3X8Y1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim55G3X8Y1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm22778-201ENSMUST00000104090 128 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm11366-201ENSMUST00000119279 429 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm13687-201ENSMUST00000119857 282 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm25325-201ENSMUST00000122559 86 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm22870-201ENSMUST00000157501 112 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm29574-201ENSMUST00000186226 696 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm28828-201ENSMUST00000186601 696 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm28159-201ENSMUST00000190296 696 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm21088-201ENSMUST00000190875 316 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm8069-201ENSMUST00000197887 154 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Gm16419-201ENSMUST00000221057 625 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim55G3X8Y1 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Mir687-201ENSMUST00000102166 89 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Mir92b-201ENSMUST00000102300 83 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm23709-201ENSMUST00000104364 130 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm24067-201ENSMUST00000104514 85 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm12125-201ENSMUST00000117261 736 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm12235-201ENSMUST00000118596 170 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm15075-201ENSMUST00000122187 477 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm23231-201ENSMUST00000157299 104 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm23534-201ENSMUST00000157539 97 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Mir6963-201ENSMUST00000183535 71 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Mir7031-201ENSMUST00000183860 65 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm29429-201ENSMUST00000187071 121 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm43405-201ENSMUST00000198642 337 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm2607-201ENSMUST00000212389 627 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm10237-201ENSMUST00000078393 273 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm23406-201ENSMUST00000082537 122 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm26164-201ENSMUST00000083793 104 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm25207-201ENSMUST00000093745 107 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim55G3X8Y1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms