Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm22116-201ENSMUST00000158791 141 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm9375-201ENSMUST00000208899 903 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm381-201ENSMUST00000117443 2037 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm16510-201ENSMUST00000153501 249 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm22431-201ENSMUST00000158545 107 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm27607-201ENSMUST00000185162 122 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm28745-201ENSMUST00000190069 305 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm14385-201ENSMUST00000116315 876 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm12383-201ENSMUST00000120628 760 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm17164-201ENSMUST00000169013 506 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Gm37966-201ENSMUST00000193122 326 ntBASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col6a3E9PWQ3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm42539-201ENSMUST00000197009 308 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm43979-201ENSMUST00000203179 475 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 CT572983.1-201ENSMUST00000226895 514 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Mir466m-201ENSMUST00000175052 84 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm19791-201ENSMUST00000180398 859 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm24661-201ENSMUST00000083205 104 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.68□□□□□ -2.14
Col6a3E9PWQ3 Gm26280-201ENSMUST00000157096 101 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm11395-201ENSMUST00000181011 499 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Mir7016-201ENSMUST00000184308 72 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm37119-201ENSMUST00000195691 389 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm27977-201ENSMUST00000185159 111 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm22897-201ENSMUST00000197860 128 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm44277-201ENSMUST00000205128 649 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm13239-201ENSMUST00000119920 637 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm23180-201ENSMUST00000158686 125 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Trbv18-201ENSMUST00000194256 294 ntBASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col6a3E9PWQ3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm22416-201ENSMUST00000158590 88 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm25119-201ENSMUST00000158815 88 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm43723-201ENSMUST00000196886 189 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Gm45313-201ENSMUST00000210584 178 ntBASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col6a3E9PWQ3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
Col6a3E9PWQ3 Gm6373-201ENSMUST00000121026 360 ntBASIC1.65□□□□□ -2.14
Col6a3E9PWQ3 Gm16326-201ENSMUST00000162843 414 ntBASIC1.65□□□□□ -2.14
Col6a3E9PWQ3 Gm28500-201ENSMUST00000190286 151 ntBASIC1.65□□□□□ -2.14
Col6a3E9PWQ3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.65□□□□□ -2.14
Col6a3E9PWQ3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 Gm15302-201ENSMUST00000117779 2630 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 Gm21742-201ENSMUST00000189352 548 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Col6a3E9PWQ3 Mir141-201ENSMUST00000083540 72 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms