Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.38□□□□□ -2.19
Col6a5A6H584 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col6a5A6H584 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.38□□□□□ -2.19
Col6a5A6H584 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col6a5A6H584 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm6461-201ENSMUST00000120015 633 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm6373-201ENSMUST00000121026 360 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm24857-201ENSMUST00000158061 310 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm43626-201ENSMUST00000198575 162 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm43967-201ENSMUST00000203787 301 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm44903-201ENSMUST00000206840 130 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Col6a5A6H584 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm22116-201ENSMUST00000158791 141 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm22565-201ENSMUST00000175540 69 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm28724-202ENSMUST00000194218 295 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm45072-201ENSMUST00000208673 929 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 AC124400.1-201ENSMUST00000225779 193 ntBASIC1.37□□□□□ -2.19
Col6a5A6H584 Gm24555-201ENSMUST00000104548 124 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm15161-201ENSMUST00000117340 387 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm22945-201ENSMUST00000158557 157 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm25247-201ENSMUST00000175475 90 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm15235-201ENSMUST00000200572 194 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm44881-201ENSMUST00000205425 367 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm15267-201ENSMUST00000120888 464 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col6a5A6H584 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col6a5A6H584 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm29288-201ENSMUST00000191582 901 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a5A6H584 AC124549.2-201ENSMUST00000224243 222 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm24661-201ENSMUST00000083205 104 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm14469-201ENSMUST00000118363 202 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm23083-201ENSMUST00000157851 116 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm20542-201ENSMUST00000174582 372 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm44052-201ENSMUST00000203382 396 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.36□□□□□ -2.19
Col6a5A6H584 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Col6a5A6H584 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.36□□□□□ -2.19
Col6a5A6H584 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm15785-201ENSMUST00000119145 694 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Mir6353-201ENSMUST00000183596 113 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.35□□□□□ -2.19
Col6a5A6H584 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.35□□□□□ -2.19
Col6a5A6H584 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col6a5A6H584 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm14669-201ENSMUST00000118841 250 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm14867-201ENSMUST00000120156 866 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm7209-201ENSMUST00000122339 333 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm26280-201ENSMUST00000157096 101 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Gm17164-201ENSMUST00000169013 506 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Mir7016-201ENSMUST00000184308 72 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.35□□□□□ -2.19
Col6a5A6H584 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Col6a5A6H584 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm13471-201ENSMUST00000122057 433 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm26181-201ENSMUST00000157687 106 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm24900-201ENSMUST00000158128 134 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm28437-201ENSMUST00000190277 783 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm9375-201ENSMUST00000208899 903 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm19233-201ENSMUST00000219772 936 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col6a5A6H584 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.34□□□□□ -2.19
Col6a5A6H584 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.34□□□□□ -2.2
Col6a5A6H584 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.34□□□□□ -2.2
Col6a5A6H584 Gm25991-201ENSMUST00000102439 99 ntBASIC1.34□□□□□ -2.2
Col6a5A6H584 Gm13755-201ENSMUST00000118509 305 ntBASIC1.34□□□□□ -2.2
Col6a5A6H584 Gm23120-201ENSMUST00000157654 287 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms