Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm23691-201ENSMUST00000101878 107 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm22493-201ENSMUST00000104494 132 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm14622-201ENSMUST00000117117 468 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm13627-201ENSMUST00000119700 706 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm14599-201ENSMUST00000120469 474 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm25270-201ENSMUST00000122606 138 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm25605-201ENSMUST00000158364 124 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm21893-201ENSMUST00000179119 397 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Mir7074-201ENSMUST00000183884 63 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Mir8106-201ENSMUST00000184520 139 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm7871-201ENSMUST00000195346 618 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm7948-201ENSMUST00000212607 844 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 Gm18116-201ENSMUST00000220920 537 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.57□□□□□ -2
Trem1Q9JKE2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trem1Q9JKE2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trem1Q9JKE2 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm15466-201ENSMUST00000122299 333 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm16533-201ENSMUST00000140035 228 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm17946-201ENSMUST00000186856 538 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm29184-201ENSMUST00000190038 334 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm38053-201ENSMUST00000193938 160 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm44391-201ENSMUST00000198490 93 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm45400-201ENSMUST00000211603 653 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm7119-201ENSMUST00000221345 695 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Gm23249-201ENSMUST00000083369 161 ntBASIC2.56□□□□□ -2
Trem1Q9JKE2 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trem1Q9JKE2 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Trem1Q9JKE2 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trem1Q9JKE2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm22194-201ENSMUST00000116869 95 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm14647-201ENSMUST00000119392 680 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm11785-201ENSMUST00000120165 601 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm14506-201ENSMUST00000121165 536 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm23559-201ENSMUST00000157824 103 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm26362-201ENSMUST00000158865 315 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Snord53-201ENSMUST00000175146 78 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm24754-201ENSMUST00000177997 107 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm5224-201ENSMUST00000183060 350 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Mir7031-201ENSMUST00000183860 65 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm29263-201ENSMUST00000188718 463 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm28384-201ENSMUST00000189079 463 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm8041-201ENSMUST00000199755 616 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm44548-201ENSMUST00000208929 192 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 AC158525.1-201ENSMUST00000223806 576 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trem1Q9JKE2 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm6776-201ENSMUST00000057752 900 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 Mir423-201ENSMUST00000083584 109 ntBASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trem1Q9JKE2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trem1Q9JKE2 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trem1Q9JKE2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm12386-201ENSMUST00000117380 688 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms