Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Snora31-201ENSMUST00000083213 130 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm25755-201ENSMUST00000083396 107 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm25859-201ENSMUST00000083710 91 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm8074-201ENSMUST00000095071 252 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm13046-201ENSMUST00000117391 501 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm12149-201ENSMUST00000117511 654 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm12722-201ENSMUST00000118507 493 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm14159-201ENSMUST00000119832 451 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm14049-201ENSMUST00000121009 636 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm23887-201ENSMUST00000122683 172 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm22036-201ENSMUST00000157279 215 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm23078-201ENSMUST00000157848 148 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm24713-201ENSMUST00000178850 107 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm26189-201ENSMUST00000179879 107 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm25448-201ENSMUST00000180065 107 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm8392-201ENSMUST00000185647 835 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm37869-201ENSMUST00000193385 595 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm18540-201ENSMUST00000204025 526 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm44910-201ENSMUST00000208451 396 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm18774-201ENSMUST00000218269 601 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm23932-201ENSMUST00000082914 107 ntBASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim54Q9ERP3 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm23175-201ENSMUST00000104371 132 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm23415-201ENSMUST00000175519 83 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm21726-201ENSMUST00000179654 392 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm22631-201ENSMUST00000179656 94 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm42924-201ENSMUST00000197261 185 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm43708-201ENSMUST00000198857 961 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm44609-201ENSMUST00000207157 460 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Gm35558-203ENSMUST00000222264 204 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim54Q9ERP3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm15231-201ENSMUST00000119174 447 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm9043-201ENSMUST00000119677 314 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm13751-201ENSMUST00000120280 752 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm13574-201ENSMUST00000120482 394 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm12368-201ENSMUST00000122251 434 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm27317-201ENSMUST00000183533 95 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm28069-201ENSMUST00000189926 214 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm37568-201ENSMUST00000191755 364 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms