Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7093-201ENSMUST00000223004 581 ntBASIC4.96□□□□□ -1.62
Clp1Q99LI9 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.96□□□□□ -1.62
Clp1Q99LI9 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.96□□□□□ -1.62
Clp1Q99LI9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Clp1Q99LI9 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Clp1Q99LI9 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Clp1Q99LI9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Clp1Q99LI9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Clp1Q99LI9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Clp1Q99LI9 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm11631-201ENSMUST00000119220 156 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm12815-201ENSMUST00000121737 135 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm26024-201ENSMUST00000158657 322 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm24264-201ENSMUST00000179835 94 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm27165-201ENSMUST00000183951 232 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm18357-201ENSMUST00000188184 580 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm44157-201ENSMUST00000204720 410 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm32536-201ENSMUST00000205209 445 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm44513-201ENSMUST00000206811 439 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm45434-201ENSMUST00000210550 293 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm45860-201ENSMUST00000212700 334 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.95□□□□□ -1.62
Clp1Q99LI9 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Clp1Q99LI9 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Clp1Q99LI9 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm22936-201ENSMUST00000103955 126 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm12647-201ENSMUST00000118977 265 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm15745-201ENSMUST00000119807 115 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm14619-201ENSMUST00000120480 168 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm11456-201ENSMUST00000121070 256 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm15213-201ENSMUST00000122098 216 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm26414-201ENSMUST00000157674 269 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm22389-201ENSMUST00000158193 301 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm17065-201ENSMUST00000165245 239 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm13249-201ENSMUST00000177803 345 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm6214-201ENSMUST00000178845 541 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm13144-201ENSMUST00000179385 345 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm28534-201ENSMUST00000187744 676 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm24316-201ENSMUST00000083041 107 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm23845-201ENSMUST00000083834 152 ntBASIC4.94□□□□□ -1.62
Clp1Q99LI9 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Clp1Q99LI9 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm22204-201ENSMUST00000122654 327 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm24961-201ENSMUST00000157918 184 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm23781-201ENSMUST00000157940 308 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm24944-201ENSMUST00000158330 128 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm23760-201ENSMUST00000158350 116 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm23759-201ENSMUST00000158351 268 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm23115-201ENSMUST00000158480 108 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm25264-201ENSMUST00000158519 117 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm6802-202ENSMUST00000186566 126 ntBASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.93□□□□□ -1.62
Clp1Q99LI9 Gm20257-202ENSMUST00000188643 130 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms