Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm26215-201ENSMUST00000158584 139 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm43669-201ENSMUST00000198229 436 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm43600-201ENSMUST00000202134 223 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm43930-201ENSMUST00000203868 845 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm18414-201ENSMUST00000210858 694 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Gm25792-201ENSMUST00000083289 100 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm7327-201ENSMUST00000120925 652 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm8880-201ENSMUST00000121800 454 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm14129-201ENSMUST00000122436 291 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm25321-201ENSMUST00000122558 102 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm27520-201ENSMUST00000184872 81 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm2436-201ENSMUST00000219562 774 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.42□□□□□ -2.02
Lsm1Q8VC85 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm22497-201ENSMUST00000104499 131 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm14588-201ENSMUST00000119895 172 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm28779-201ENSMUST00000189678 323 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm44526-201ENSMUST00000204664 121 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm23723-201ENSMUST00000082996 132 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm24928-201ENSMUST00000083399 107 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm25897-201ENSMUST00000083709 107 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.41□□□□□ -2.02
Lsm1Q8VC85 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Lsm1Q8VC85 Gm24126-201ENSMUST00000104111 106 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm15466-201ENSMUST00000122299 333 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm23980-201ENSMUST00000157135 158 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm24959-201ENSMUST00000157924 146 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm17538-201ENSMUST00000168236 327 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm24968-201ENSMUST00000179817 107 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Mir7578-201ENSMUST00000183455 82 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm43264-201ENSMUST00000202284 325 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm45395-201ENSMUST00000209891 559 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm9762-201ENSMUST00000036976 444 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm5471-201ENSMUST00000072732 337 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm23628-201ENSMUST00000082464 173 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.4□□□□□ -2.03
Lsm1Q8VC85 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Gm11460-201ENSMUST00000118200 361 ntBASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Gm14411-201ENSMUST00000121798 914 ntBASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.39□□□□□ -2.03
Lsm1Q8VC85 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms