Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14537-201ENSMUST00000117464 599 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm16171-201ENSMUST00000118004 324 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14292-201ENSMUST00000118761 456 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14669-201ENSMUST00000118841 250 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm13873-201ENSMUST00000119208 427 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm12706-201ENSMUST00000121588 698 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22026-201ENSMUST00000122735 281 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22986-201ENSMUST00000122753 130 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27592-201ENSMUST00000157729 126 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22516-201ENSMUST00000158266 124 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm16111-201ENSMUST00000162128 285 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22174-201ENSMUST00000175050 125 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22692-201ENSMUST00000175055 125 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27634-201ENSMUST00000175060 126 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22460-201ENSMUST00000175269 124 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25535-201ENSMUST00000175364 125 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24365-201ENSMUST00000175384 125 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm44310-201ENSMUST00000175424 126 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22639-201ENSMUST00000175591 125 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22166-201ENSMUST00000178419 121 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24979-201ENSMUST00000178626 126 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm4479-201ENSMUST00000178807 171 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23288-201ENSMUST00000179213 121 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24306-201ENSMUST00000180229 79 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27743-201ENSMUST00000185136 126 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5731-201ENSMUST00000190969 481 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm42621-201ENSMUST00000198114 275 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm44355-201ENSMUST00000200417 104 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm44076-201ENSMUST00000203072 520 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm20304-201ENSMUST00000218168 444 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5374-201ENSMUST00000222868 657 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25008-201ENSMUST00000083809 81 ntBASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24120-201ENSMUST00000103978 129 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm6923-201ENSMUST00000118343 406 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24213-201ENSMUST00000158255 258 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18588-201ENSMUST00000177308 492 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Mir6541-201ENSMUST00000183649 110 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27233-201ENSMUST00000184030 307 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Mir8096-201ENSMUST00000184526 127 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm17781-201ENSMUST00000195232 649 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37817-201ENSMUST00000195276 434 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43708-201ENSMUST00000198857 961 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43393-201ENSMUST00000200147 194 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 AC157017.1-201ENSMUST00000220148 364 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.12□□□□□ -1.91
Ccdc28bQ8CEG5 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22272-201ENSMUST00000104039 134 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Snord66-201ENSMUST00000104051 75 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm15177-201ENSMUST00000120491 577 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm11522-201ENSMUST00000120533 176 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24060-201ENSMUST00000157494 95 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22840-201ENSMUST00000158444 136 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm21729-201ENSMUST00000180058 664 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm21853-201ENSMUST00000180071 664 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Mir6341-201ENSMUST00000183490 121 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm28628-201ENSMUST00000187006 264 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm28629-201ENSMUST00000187309 263 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm29495-201ENSMUST00000189319 664 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Mir129b-201ENSMUST00000197461 65 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43407-201ENSMUST00000199816 317 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm19177-201ENSMUST00000204520 613 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms