Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm23175-201ENSMUST00000104371 132 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm12276-201ENSMUST00000121709 301 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm13406-201ENSMUST00000121991 256 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm24060-201ENSMUST00000157494 95 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm25666-201ENSMUST00000157702 107 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm23666-201ENSMUST00000158053 116 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm26460-201ENSMUST00000175061 126 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm24811-201ENSMUST00000175313 100 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Mir5098-201ENSMUST00000175320 82 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm27599-201ENSMUST00000183758 174 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm28552-201ENSMUST00000190725 388 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm43407-201ENSMUST00000199816 317 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm44295-201ENSMUST00000203805 437 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm7407-201ENSMUST00000208301 568 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm23093-201ENSMUST00000083450 102 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.29□□□□□ -1.72
Vps53Q8CCB4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Mir592-201ENSMUST00000102113 96 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm22497-201ENSMUST00000104499 131 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm14670-201ENSMUST00000117327 337 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm13331-201ENSMUST00000117500 448 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm13650-201ENSMUST00000117729 433 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm15195-201ENSMUST00000118775 263 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm14566-201ENSMUST00000118915 321 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm24550-201ENSMUST00000158648 279 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm37757-201ENSMUST00000193072 210 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm37617-201ENSMUST00000194309 159 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm37523-201ENSMUST00000194901 412 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm8747-201ENSMUST00000195392 751 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm44343-201ENSMUST00000196702 90 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm43651-201ENSMUST00000199796 439 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm43472-201ENSMUST00000200175 154 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm7039-201ENSMUST00000205138 346 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm19219-201ENSMUST00000215863 724 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm26128-201ENSMUST00000083170 110 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm10242-201ENSMUST00000090064 330 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Vps53Q8CCB4 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm22115-201ENSMUST00000103976 133 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm23923-201ENSMUST00000104108 133 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm24376-201ENSMUST00000104399 127 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm14469-201ENSMUST00000118363 202 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm14359-201ENSMUST00000118883 424 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm6797-201ENSMUST00000119440 512 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm13239-201ENSMUST00000119920 637 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm9498-201ENSMUST00000140849 291 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm21638-201ENSMUST00000179473 836 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm23144-201ENSMUST00000180226 107 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm5731-201ENSMUST00000190969 481 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Gm44887-201ENSMUST00000208980 178 ntBASIC4.27□□□□□ -1.73
Vps53Q8CCB4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Vps53Q8CCB4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms