Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6012-201ENSMUST00000210821 730 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm6462-201ENSMUST00000081488 304 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Snord71-201ENSMUST00000104361 85 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm13627-201ENSMUST00000119700 706 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm17161-201ENSMUST00000169187 524 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm27636-201ENSMUST00000184528 122 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm28163-201ENSMUST00000187099 325 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Snora69-201ENSMUST00000083708 131 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm20345-201ENSMUST00000175839 2414 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Mir147-201ENSMUST00000102354 79 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm13510-201ENSMUST00000118659 429 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm12721-201ENSMUST00000120621 268 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm25520-201ENSMUST00000158389 118 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 CT030030.1-201ENSMUST00000218809 152 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm5670-201ENSMUST00000093546 372 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm12765-201ENSMUST00000117273 615 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm25966-201ENSMUST00000157169 117 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm27668-201ENSMUST00000184188 120 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm43198-201ENSMUST00000200927 326 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.5□□□□□ -2.17
Col6a6Q8C6K9 Gm24096-201ENSMUST00000103905 110 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm42465-201ENSMUST00000197036 492 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm23140-201ENSMUST00000082487 107 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm12401-201ENSMUST00000118435 228 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm17153-201ENSMUST00000171314 490 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Gm17946-201ENSMUST00000186856 538 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col6a6Q8C6K9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Gm14905-201ENSMUST00000122351 639 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Gm15275-201ENSMUST00000154752 347 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Gm27718-201ENSMUST00000183721 86 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Gm18861-201ENSMUST00000202509 1186 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col6a6Q8C6K9 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm11350-201ENSMUST00000121436 870 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm15488-201ENSMUST00000121682 670 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm37708-201ENSMUST00000192337 895 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm19457-201ENSMUST00000200995 448 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Snord104-201ENSMUST00000083192 70 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm25945-201ENSMUST00000122484 135 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm22158-201ENSMUST00000158411 126 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm37428-201ENSMUST00000193886 137 ntBASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col6a6Q8C6K9 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm25170-201ENSMUST00000104191 129 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm22072-201ENSMUST00000116850 121 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm23234-201ENSMUST00000157304 134 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms